Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 833 a.a., penicillin-binding protein 1A MrcA from Phaeobacter inhibens DSM 17395

 Score =  400 bits (1028), Expect = e-115
 Identities = 277/822 (33%), Positives = 416/822 (50%), Gaps = 63/822 (7%)

Query: 11  VKFIKRLLVFSLICIILGVTTI---FGFYFYVKS-DLPDVATLRDVQLQTPMQVFSQDGK 66
           V+FI          I LG+  I    G  F++   DLP   +L   Q  T  +++S +G 
Sbjct: 2   VRFILSFFGSIFSTITLGIAMIALTIGAVFWIYGRDLPSHESLAQYQPPTISRIYSGEGA 61

Query: 67  LIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAF-AVLASGSAS 125
           LI +F ++RR+    EE+P  + +A I+ ED  +Y H G+D  GI  AA  AV + GS  
Sbjct: 62  LIDEFAQERRLFTPSEEIPDLVKQAFISAEDKNFYSHNGYDMRGIAAAAVEAVRSRGSNV 121

Query: 126 QGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYG 185
           +GASTITQQ+ +NF LS ++K  RKVKE+ +A  +E+ LSK +ILELY+N+I+LG  SYG
Sbjct: 122 RGASTITQQVMKNFLLSGDRKAERKVKELILASRLEETLSKDKILELYMNEIFLGQNSYG 181

Query: 186 VGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYI 245
           V AAAQ YF K + +LT  E A +A +PKAPS  +P+   +R  NRRN VL+ M +  YI
Sbjct: 182 VTAAAQTYFNKTLSELTPHEAATLASMPKAPSDYHPVRQKQRLLNRRNYVLREMRENGYI 241

Query: 246 TKAEYDAARAEPVLPKYHGAEIELNA-----PYVAEIARAWMVERYGEEAAYTSGMNVYT 300
           + A Y     +P+    +G             Y  +  R  + E +GE   +T G  V  
Sbjct: 242 SDAVYKVEVDQPLRSVQNGDFDSFRTALPPRDYFTDEIRRQLSEDFGEGEFFTGGFTVRA 301

Query: 301 TVDSKLQRAANQAAINNLLAYDERHG-YRGAEKEL---WQVNQPAWSSTQLSEYLSNEPT 356
           T+D ++Q  A  A    L  YD   G +RG    L      ++ +W +   +  +  +  
Sbjct: 302 TIDEEMQTEAAVALRGGLEKYDRSRGNWRGTGVTLDAEALASEESWRAALSNASVPRDIN 361

Query: 357 YGDMF-PAAVLSVEEKSAQVWVKSYG-VQTIAWEDMNWARRFINDDRQGPLPKSANEFLA 414
            G  + PA  L V ++S +V ++    + ++   D+ W +    D+            ++
Sbjct: 362 LGGKWHPAVALEVGDQSLRVGIEEVAEIGSVPRSDIKWMKGSFKDN------------IS 409

Query: 415 AGQQIWVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQ 474
           AG  + VR   +DGA+  W L QVP     FVAM+   G V A+ GGF++ H+ FNRATQ
Sbjct: 410 AGDVVLVRAVEKDGALQHWSLRQVPEVQGGFVAMDVNTGRVLAMQGGFSYQHSVFNRATQ 469

Query: 475 SVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLR 534
           + RQ GSS KPF+Y+AAL+ G + AT++ DAPI + +  QG  WRPKNS   + GPT LR
Sbjct: 470 AQRQPGSSFKPFVYAAALDSGYSPATIVVDAPI-EINTPQG-LWRPKNSSNKFYGPTPLR 527

Query: 535 IGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFS 594
            G+  S+N+M +R+ +EVG++    Y  RFG   + +      +LGA   T  +M   ++
Sbjct: 528 TGIEMSRNLMTIRLAQEVGMEVVAGYAERFGV-YNNMGAFLANSLGAEETTLYKMVAAYA 586

Query: 595 VFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVIS 654
           +FAN G  V+P  + R+++  G            +R    +  + A    A+  AP+++ 
Sbjct: 587 MFANGGERVQPTLVDRIQDRRGE---------TIYRHDDRDCVDCASPALAAGQAPRIVD 637

Query: 655 EQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRR-DIGGKTGTTNDSKDAWYNG 713
                  RE +   I      S   G    G  +  +       GKTGTTNDS+D W+ G
Sbjct: 638 ------NREQVMDPITAYQLTSMMRGVVDRGTASSVIDLPVPTAGKTGTTNDSRDVWFVG 691

Query: 714 YAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPV 773
           +   IV   ++G+ D  R +G+ A              GG    P + +FM  A      
Sbjct: 692 FTSNIVAGCYMGY-DQPRPMGRGA-------------YGGTMCGPVFQQFMKKATAKYGG 737

Query: 774 QQKAVPNNIARVRIDRDTG--LLTNKLDSSSMFEYFEAGTEP 813
            + AVP     ++IDR TG  L      ++ + EYF  G EP
Sbjct: 738 GKFAVPEGGHFIKIDRFTGARLADAASGANVVAEYFRDGAEP 779