Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., transglycosylase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  250 bits (639), Expect = 2e-70
 Identities = 198/753 (26%), Positives = 331/753 (43%), Gaps = 111/753 (14%)

Query: 44  PDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEH 103
           P V  +    L+   ++++ DGKLI ++ ++ R P+   E+   +++A++ATED R+Y+H
Sbjct: 39  PSVRDIIAPTLRVGSELYTADGKLIGRYFKENRTPVNYNEIAPSVVQALVATEDVRFYKH 98

Query: 104 YGFDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKK-------------VMRK 150
           +G D   + RA   +   G    GASTITQQLA+N + +   K             ++ K
Sbjct: 99  WGIDLQAVARAVVGLGKDG----GASTITQQLAKNLYRTRYNKSQGLLIKIPLVRTLIVK 154

Query: 151 VKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIA 210
           +KE   A+ +E   SK +I+ +YLN +  G  +YG+  A++ YF KE KDL   + A++ 
Sbjct: 155 LKEWMTAVKLESNYSKNDIITMYLNTVSFGNNTYGIKTASRIYFDKEAKDLATTDAAMLV 214

Query: 211 GLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIELN 270
           G+ K  +  NP  +  +A  RRNVVL +M   KY++K        EP+  K    +   +
Sbjct: 215 GMLKGTTLYNPTKNPAKALERRNVVLAQMNKYKYLSKDSLTELSKEPIKLKEGKMQDGSD 274

Query: 271 APYVAEIARAWMVERYGEEAA---YTSGMNVYTTVDSKLQRAANQAAINNLLAYDERHGY 327
                  A A  +E++  +     Y  G+ +YTT+DSKLQ+ A +A  + +     R   
Sbjct: 275 GDSYLRAAVAKYLEKWCTDNGYDLYEDGLKIYTTIDSKLQKYAEEAVADQMRILQRRFYN 334

Query: 328 RGAEKELW------QVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVKSY- 380
               ++ W      +V+ P  +   L  Y   +  + +  P +V +   K  ++ + +Y 
Sbjct: 335 VWGNEDPWYDSEKQKVDYPDRAMKNLPIYTILQKKFPNN-PDSVTAYFNKKKRMQIFTYK 393

Query: 381 GVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAITAWKLTQVPN 440
           G +   +  ++  R +              + +  G    +      G I  W       
Sbjct: 394 GDRDTLFSTLDSIRYY-------------GKIMNTGM---MTMEPASGKIKVW------- 430

Query: 441 ANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLAT 500
                             VGG +    K++   QS RQ GS+ KPF Y  AL +G++   
Sbjct: 431 ------------------VGGIDHKFFKYDHVNQSKRQAGSTFKPFAYLTALEQGMSPCD 472

Query: 501 LINDAPIN--QWDESQGTAWRPKNSPPTYT-GPTRLRIGLAQSKNVMAVRVLREVGLDET 557
              D P+     D+ +   W PKN+  + +     LR  +A+S N +  +V  +VG D  
Sbjct: 473 KFTDKPVKIAYQDKGETKYWEPKNADYSVSYREMSLRWAMAKSVNTITAQVTEKVGWDNV 532

Query: 558 REYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGN 617
            +Y    G     L    +++LG+  +T  +M + ++ F N G   +P  + ++ +   N
Sbjct: 533 VKYAHECGID-SHLESVPSVSLGSNDVTVYEMVKAYATFMNKGIKTDPILVEKITDQDNN 591

Query: 618 IEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSS 677
           +                 +DEF       P   +V++E+ A+L   M      GG E   
Sbjct: 592 L-----------------IDEF------KPKTKRVLTEEIAWLMTYMFR----GGMEEPE 624

Query: 678 DTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTA 737
            T      W     K   IGGKTGT++D  DAWY G    +V   WVG D+      +TA
Sbjct: 625 GTSQALWEWPDLFRKNNQIGGKTGTSSDYVDAWYMGLTKDLVTGVWVGCDE------RTA 678

Query: 738 PNRNIEDDVSGAESGGKTALPAWVEFMSLALQD 770
             +N E        G +TALP + +FM     D
Sbjct: 679 HFKNGEQG-----EGSRTALPIFAKFMEKVYLD 706