Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., membrane carboxypeptidase/penicillin-binding protein from Dechlorosoma suillum PS

 Score =  285 bits (729), Expect = 7e-81
 Identities = 222/742 (29%), Positives = 335/742 (45%), Gaps = 110/742 (14%)

Query: 44  PDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEH 103
           P ++ LR  + + P ++ S DGK +A F    R  +KL ++   ++EA+IATED R+Y+H
Sbjct: 56  PGISDLRKAKQEQPARILSADGKELAVFKRANREWVKLAQVSPRVVEALIATEDHRFYQH 115

Query: 104 YGFDPIGITRAAFAVLASGSAS-QGASTITQQLARNFF---LSNEKKVMRKVKEIFIAIH 159
           +G D     R A A L + S   QG ST+TQQLARN +   +     + RK+KE   A+ 
Sbjct: 116 HGID---WRRTAGAALNTFSGDRQGGSTLTQQLARNLYPDEIGRAPTLTRKLKEAITALK 172

Query: 160 IEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTM 219
           IE L +K+EILE YLN +   Y +YG+  AA+ YF     +L + + A + G+ K  S  
Sbjct: 173 IEALYTKEEILETYLNTVPFLYNAYGIEMAARTYFDTSAGNLDVLQSATLVGMLKGNSYY 232

Query: 220 NPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPV-LPKYHGAEIELNAPYVAEIA 278
           NP+ + ERA  RRN VL +M+  + ++ A++D  + +P+ L     +E E  AP+ A+  
Sbjct: 233 NPVLNPERAVQRRNTVLAQMVKRERLSPAQFDGLKKKPLRLDFERQSEPEGPAPHFAQQL 292

Query: 279 RAWMVERYGEEA--AYTSGMNVYTTVDSKLQRAANQAAINNLLAYDERHGYRGAEKELWQ 336
           R W++    +    AY  G+ VYTT+DS+LQ  ANQA          R GY         
Sbjct: 293 RKWLIAWADDHGYNAYADGLVVYTTLDSRLQAWANQAV--------ARQGY--------- 335

Query: 337 VNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVKSYGVQTIAWEDMNWARRF 396
                                          ++ ++   W +  G     W   N   R 
Sbjct: 336 ------------------------------VLQNQADAAWNRRGG-----WNAANPLVRT 360

Query: 397 INDDRQGPLPKSANEFLAA-GQQIWVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAV 455
           +     G  P+  +   A  GQ+  ++    D A  A    Q       F+A++P NG V
Sbjct: 361 L----VGETPEFRSAVAAGLGQEEALKKLLADKAFMAALRQQKTRIQAGFLALDPRNGQV 416

Query: 456 TALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQG 515
            A VG  +F  + F+   Q+ RQ GS+ KPF+Y AA  +G        D  + +   + G
Sbjct: 417 RAWVGSRDFSQDAFDHVQQAKRQPGSTFKPFVYGAAFLRGAQPGDSRMDQAV-EIPLAGG 475

Query: 516 TAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSE 575
             WRP +  P    P  L   LA SKN +  ++++EVG           G +  +L    
Sbjct: 476 EIWRPADHEPPSNQPITLATALALSKNTVTAQLMQEVGAVRVARLAQAMGIRQSRLETVP 535

Query: 576 TIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSE 635
           ++ALG   ++  +M   +   AN G ++EP  +SR+EN  G I                 
Sbjct: 536 SLALGTSPVSLREMVAAYGTIANGGGYLEPVLVSRIENGKGKI----------------- 578

Query: 636 LDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRD 695
           L EFA  D      PKV     A+   + +   I  G          G+  R++   R D
Sbjct: 579 LAEFAPADPEPALPPKV-----AYTLVDTMRGVIDRG---------TGSAIRSRFGIRAD 624

Query: 696 IGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKT 755
           + GKTGTT D+ D W+    P +V  AWVGF+D             +  D  G   G  +
Sbjct: 625 VAGKTGTTQDNTDGWFILMHPQLVAGAWVGFND---------ARITLRSDYWG--QGAHS 673

Query: 756 ALPAWVEFMSLALQDVPVQQKA 777
           ALP   +F   AL+   +  KA
Sbjct: 674 ALPMVGDFFQQALRSRQIDAKA 695