Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 746 a.a., penicillin-binding protein 1B from Marinobacter adhaerens HP15

 Score =  165 bits (417), Expect = 1e-44
 Identities = 90/247 (36%), Positives = 139/247 (56%), Gaps = 4/247 (1%)

Query: 76  RIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQL 135
           R+ ++L+E+P  L   ++A ED  +Y+H+G  P+ I RA  A + +G   QG ST+TQQL
Sbjct: 143 RVLVQLDEVPALLPTTLMAVEDRNFYDHFGIAPLSIGRAMLANIQAGRIVQGGSTLTQQL 202

Query: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS----YGVGAAAQ 191
            +NFFL+ E+ ++RK  E  +++ +E    K +ILE YLN++YLG       +G G A+Q
Sbjct: 203 VKNFFLTREQTLVRKANEALMSVLLELHYEKDDILETYLNEVYLGQAGTRSIHGFGLASQ 262

Query: 192 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYD 251
            YFG+ +KDL + +IAL+ G+ K PS  NP    ERAT RRN+V+  M     I      
Sbjct: 263 FYFGESLKDLDVHQIALLVGMVKGPSYYNPRRHPERATERRNLVISEMEQAGLIEPGRAS 322

Query: 252 AARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN 311
            AR  P+      +  E   P   ++ R  +   Y EE   + G+ ++TT++  +Q AA 
Sbjct: 323 RARGLPLGVSERPSYSENRYPAYIDLVRRHLARDYKEEDLRSEGLRIFTTLNPAIQYAAE 382

Query: 312 QAAINNL 318
            A  + L
Sbjct: 383 YAVTDTL 389



 Score =  123 bits (309), Expect = 3e-32
 Identities = 111/375 (29%), Positives = 175/375 (46%), Gaps = 64/375 (17%)

Query: 451 ENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALN--KGLTLATLINDAPIN 508
           ++G V ALVGG +     FNRA  + R +GS IKPFIY +AL   +  TL T + D    
Sbjct: 411 DSGEVLALVGGRDPQFAGFNRALDANRPIGSLIKPFIYLSALQEPERYTLTTPVLDKSFT 470

Query: 509 -QWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTRFGFK 567
            ++D+  G  W+PKN      G   L   L+ S N+ AVRV  ++G+D  +E LT FG  
Sbjct: 471 LEFDD--GKRWQPKNYDGEERGEVPLHKALSHSYNLPAVRVGLDIGVDRVQETLTAFGVD 528

Query: 568 LDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVV 627
              + R  ++ LG+ S++PV +AQ +   A +G+            P   I         
Sbjct: 529 -TPISRYPSMLLGSVSMSPVTVAQIYQGLATSGF----------NTPLRTI--------- 568

Query: 628 CHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWR 687
             RE +      A  +A S Y+ +V    +      + Y+          +T   GTG  
Sbjct: 569 --REVTD-----AGGEALSRYSLEVEQVADPAAVHLVQYA--------MQETMQEGTGRS 613

Query: 688 A--QALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDD 745
           A     +   + GKTGTT+D +D+W+ G++  ++ VAWVG DD+    G T         
Sbjct: 614 AYYTVPEELSLAGKTGTTDDGRDSWFAGFSGDLLAVAWVGRDDN----GPT--------- 660

Query: 746 VSGAESGGKTALPAWVEFMSLALQDVPVQ--QKAVPNNIARVRIDRDTGLLTNKLDSSSM 803
              + +G   ALP W  FM+     VP       VP+ ++   ++ +   LT++   ++ 
Sbjct: 661 ---SLTGASGALPVWSRFMA----QVPQHGFSPVVPDGVSYHWVNSERQALTDEYCDNAR 713

Query: 804 FEYFEAGTEPTEYVS 818
              + AG+EPT+ +S
Sbjct: 714 LLPYIAGSEPTQTIS 728