Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., multimodular transpeptidase-transglycosylase PbpC from Caulobacter crescentus NA1000

 Score =  162 bits (410), Expect = 6e-44
 Identities = 108/317 (34%), Positives = 164/317 (51%), Gaps = 20/317 (6%)

Query: 22  LICIILGVTTIFG-----FYFYVKSD--LPDVATLRDVQLQTPMQVFSQDGKLIAQFGEK 74
           L+  +L V ++ G     ++ Y+K    LP    L  V     ++   ++G++IA  G +
Sbjct: 90  LVGFLLAVLSVAGGGAYVWFKYLKDTPALPSREALFAVNRAPGIRFEDRNGQVIATRGPR 149

Query: 75  RRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQ 134
               + L  +P  +  A +A ED R+Y+H   D  GI RAA+    +G   QGAST+TQQ
Sbjct: 150 YGQRITLGTVPNYVPMAFLAAEDRRFYQHGAIDVQGIARAAWINWRAGKTRQGASTLTQQ 209

Query: 135 LARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYF 194
           LA+  FL+ ++ V RK++E+ +A  +EQ+L+K EILELYLN+IY G  +YG+  A+Q YF
Sbjct: 210 LAKGLFLTPDRVVKRKLQEMLLAYKLEQILTKDEILELYLNRIYFGAGTYGIDGASQTYF 269

Query: 195 GKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAAR 254
           GK    LTL E AL+A LPKAPS +     +ERA  R  ++L  M  E +IT  +   +R
Sbjct: 270 GKPASQLTLSEAALLASLPKAPSRLALTRDMERALARSRLILANMRKEGWITPEQ--ESR 327

Query: 255 AEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMN-----VYTTVDSKLQRA 309
           A    P+     ++    Y       W+++    EA   +G N     V  T+D  LQ  
Sbjct: 328 ALDDTPRLSPMALQDEGDY------GWVLDYATAEAVKIAGQNAPDLVVRLTIDPLLQSE 381

Query: 310 ANQAAINNLLAYDERHG 326
             +     +     R G
Sbjct: 382 GAEVVRQTMATETTRSG 398



 Score =  122 bits (307), Expect = 6e-32
 Identities = 95/325 (29%), Positives = 144/325 (44%), Gaps = 59/325 (18%)

Query: 452 NGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWD 511
           +GA+ A+VGG ++  + FNRA Q+ RQ GS+ KPF+Y+AA+ KG+    +  D P+    
Sbjct: 410 DGAIRAMVGGTDYSESPFNRAVQAKRQPGSTFKPFVYAAAVEKGVLPTDMRVDEPV---- 465

Query: 512 ESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQL 571
              GT W P+N    Y GP  +   L  S N +AV++ +EVG     + + RFG  +  L
Sbjct: 466 -KFGT-WEPENYSGGYRGPMTVEDALVTSINTVAVKLGQEVGGPAIGDLVRRFG--ITSL 521

Query: 572 PRSE--TIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCH 629
           P S   ++ALG+  +  +Q+  GF VF   G  +EP+ I  +    G   F  +P     
Sbjct: 522 PPSPDLSVALGSYEVNLLQITSGFQVFQQGGLRIEPYVIESITTQGGQQIFQHQPP---- 577

Query: 630 RECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQ 689
            +    + + A          KV+++                           GT  RA 
Sbjct: 578 -QGERRVYDVAHASMMVKMMKKVVTQ---------------------------GTAQRAA 609

Query: 690 ALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGA 749
               R + GKTGT+ + +DAW+ G+ P  V   WVG DD  + + K              
Sbjct: 610 F--GRPVAGKTGTSQNWRDAWFVGFTPDYVTGVWVGNDD-EKPMNKVV------------ 654

Query: 750 ESGGKTALPAWVEFMSLALQDVPVQ 774
             GG      W  FM  A Q + V+
Sbjct: 655 --GGDIPASIWRRFMMTAHQTLAVR 677