Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., multimodular transpeptidase-transglycosylase PbpY from Caulobacter crescentus NA1000

 Score =  400 bits (1029), Expect = e-115
 Identities = 280/809 (34%), Positives = 421/809 (52%), Gaps = 84/809 (10%)

Query: 14  IKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGE 73
           I  + V S I +      I+  + +   D+PD   L+D +  T  +V++ DG LI ++ +
Sbjct: 12  IAGVAVLSAIAVAGFAIAIYAAWLF--HDMPDAGELQDYRPPTATRVYAWDGTLIGEYSK 69

Query: 74  KRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLAS---GSASQGAST 130
           +RRI +  +++P +L +A +A ED  +++H G D  G++RA    + +   G   +G ST
Sbjct: 70  ERRIFIPYDQIPPQLAQAFLAAEDRNFFQHGGVDVGGLSRAMIKNVGNAVRGRRLEGGST 129

Query: 131 ITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAA 190
           ITQQ+A+N  L+++  V RK KE  +A  +EQ L+KQ+ILELYLN+I+LGYRS+GVGAAA
Sbjct: 130 ITQQVAKNVLLTSDATVGRKFKEAILAHRLEQSLTKQQILELYLNEIWLGYRSFGVGAAA 189

Query: 191 QAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEY 250
             YFGK + DLTL E A +A LPK P   +PI +  +A  RRN VL +M ++ +++KA+ 
Sbjct: 190 YNYFGKALPDLTLAECAYLASLPKGPDNYHPIRNRAKAITRRNWVLGQMAEQGWVSKADA 249

Query: 251 DAARAEPVL----PKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKL 306
             A AEP++    PK        +A Y  E  R   +   G       G  + TT+D +L
Sbjct: 250 QKAMAEPLVVQAAPKRAAYR---DADYFVEEVRQRGMATLGPR-LNEGGYYMRTTLDPRL 305

Query: 307 QRAANQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVL 366
           Q AA  A ++ L  YD RHG+RGA    W   +P+  + +        P+    + AA++
Sbjct: 306 QTAARVALMDGLEKYDRRHGWRGA----WGRVEPSDLNWEKKALAKAAPSERRQWRAALV 361

Query: 367 SVEEKSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQ 426
           +  +   ++ VK  G   I  EDM WA+              A + L AG  ++V    Q
Sbjct: 362 TGNDGRVRL-VKGEGEGQIVSEDMTWAK--------------AGKGLKAGDLVFVEKAAQ 406

Query: 427 DGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPF 486
            G    ++L Q+P  N A VAM P  G + ALVGG+++  + FNRATQ++RQ GSS KPF
Sbjct: 407 GG----YRLRQIPAVNGALVAMEPYTGRIVALVGGYSYSLSNFNRATQAMRQPGSSFKPF 462

Query: 487 IYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAV 546
           +Y+AAL  G T A++I D+ I  +  + G  W P+N    + G   LR GL QS N M V
Sbjct: 463 VYAAALENGYTPASVIVDSAIT-FKGANGEEWSPENYHKEFYGAQPLRKGLEQSINAMTV 521

Query: 547 RVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPF 606
           R+ + VG+ +  ++  R G   D  P    +ALGAG  TP ++   ++ F N G  VEP 
Sbjct: 522 RLAQGVGMKKIVDFAKRTGVVRDMDP-VLAMALGAGETTPFKLTAAYAPFVNGGRRVEPH 580

Query: 607 YISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLY 666
            I  V++  G + F A+ K  C R C +  +       A+P   +V+    A+    ML 
Sbjct: 581 LIELVQDREGKVIFRAD-KRDCER-CEAGFNGDESPRFAAP-GEQVMDPITAYQVTSMLQ 637

Query: 667 SNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGF 726
             +             GT   A +L  R + GKTGTTN+ + AW+ GY+P ++   ++GF
Sbjct: 638 GVV-----------QRGTAAAASSL-GRPLAGKTGTTNEYRSAWFVGYSPNLIVGVFIGF 685

Query: 727 DDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNN--IAR 784
           DD          NR++ D     E+G    +P +++FM +AL+  PV     P N   A 
Sbjct: 686 DD----------NRSLGD----GETGATGPVPMFMDFMKVALEGQPVVDFKPPKNAKFAM 731

Query: 785 VRIDRDTGLLTNKLDSSSMFEYFEAGTEP 813
           VR                + E F  GTEP
Sbjct: 732 VR---------------GVREAFRPGTEP 745