Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 833 a.a., penicillin-binding protein 1A from Burkholderia phytofirmans PsJN

 Score =  508 bits (1309), Expect = e-148
 Identities = 300/746 (40%), Positives = 435/746 (58%), Gaps = 59/746 (7%)

Query: 43  LPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYE 102
           LP +  L D + + P++V++ D  LI +FGE+RR  ++ +++P ++ +AV+A ED R+YE
Sbjct: 75  LPSLDALTDYRPKVPLRVYTADHVLIGEFGEERRSLVRFQDIPDQMKKAVLAIEDYRFYE 134

Query: 103 HYGFDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQ 162
           H G D IGI RA  + L+ G ASQGASTIT Q+ARNFFLS+EK   RK+ E+ +A  IE+
Sbjct: 135 HGGVDFIGILRAGVSDLSHGGASQGASTITMQVARNFFLSSEKTYTRKIYEMLLAYKIER 194

Query: 163 LLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPI 222
            L+K +ILELY+N+IYLG R+YG  AAA+ YFGK++KD+TL E A++AGLPKAPS  NP+
Sbjct: 195 ALTKDQILELYMNQIYLGERAYGFAAAARVYFGKDLKDITLAESAMLAGLPKAPSAYNPV 254

Query: 223 YSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIARAWM 282
            + +RA  R+  +L+RML+ KYI++ +YD A  E +  K  G E  ++A Y+AE+ R  M
Sbjct: 255 VNPKRAKIRQEYILRRMLELKYISQDQYDQAVKEEIHTKNPGNEYSVHAEYIAEMVRQMM 314

Query: 283 VERYGEEAAYTSGMNVYTTVDSKLQRAANQAAINNLLAYDERHGYRGAEKELWQVNQPAW 342
             +Y +E  YT G+NV TT+DS  Q AA +A    ++ Y+ RHGYRG E  + Q+  P  
Sbjct: 315 YAQYKDE-TYTRGLNVTTTIDSADQDAAYRAVRKGVMDYERRHGYRGPEGFV-QLPAPGD 372

Query: 343 SSTQ-LSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVKSYGVQTIAWEDMNWARRFINDDR 401
              Q + + L++ P  G++  A V     K  +  +      TI+ + + +A        
Sbjct: 373 DRDQTIDDALTDHPDNGEIIAAVVTEAAPKQVKAQLVDGTQVTISGDGLRFA-------- 424

Query: 402 QGPLPKSANEFLAAGQQIWVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGG 461
            G L   A           VR    D     W++TQ+P    A V++ P++GA+ ALVGG
Sbjct: 425 AGALSARATAATKIKVGSIVRLIADDKG--NWQITQLPQVEGALVSLTPQDGAIRALVGG 482

Query: 462 FNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQ-GTAWRP 520
           F+F  NKFN  TQ+ RQ GSS KPFIYSAAL+KGL  AT+INDAP+     +  G AW P
Sbjct: 483 FDFNKNKFNHVTQAWRQPGSSFKPFIYSAALDKGLGPATIINDAPLYFPSSTPGGDAWEP 542

Query: 521 KNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLT-RFGFKLDQLPRSETIAL 579
           K+      GP  +R+ L +SKN++++R+L  +G    ++++T RFGF  D+ P    +AL
Sbjct: 543 KDDDQP-DGPMPMRLALQKSKNLVSIRILSFIGTKYAQDFVTQRFGFDADKTPPYLPMAL 601

Query: 580 GAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEF 639
           GAG +TP+Q A  +SVFAN G+ + P+ I+ V +  G     A+P               
Sbjct: 602 GAGLVTPLQSAGAYSVFANGGFRINPYLINEVTDARGQPLSKAQPL-------------- 647

Query: 640 AEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGK 699
                A   AP+ +  +NA++   +L+S               GTG    AL R D+ GK
Sbjct: 648 ----TAGRDAPRTLEPRNAYIMNSLLHS-----------VATAGTGAGTNALHRTDLQGK 692

Query: 700 TGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPA 759
           TGTTND+KD W+ GY   +V VAW+G+ D  ++LG               E G + ALP 
Sbjct: 693 TGTTNDAKDGWFAGYQQSLVAVAWMGY-DQPKSLG-------------SREFGAQLALPI 738

Query: 760 WVEFMSLALQDVPVQQKAVPNNIARV 785
           WVE+M  AL+ VP  + A P+ +  V
Sbjct: 739 WVEYMQRALRGVPQSEPAQPDGVTSV 764