Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 839 a.a., 1A family penicillin-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  907 bits (2343), Expect = 0.0
 Identities = 462/845 (54%), Positives = 601/845 (71%), Gaps = 27/845 (3%)

Query: 11  VKFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQ 70
           +K++KR+++      +LGV  I   YFYV  DLPDV+TL++VQLQTP++++S DGKLI+Q
Sbjct: 1   MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQ 60

Query: 71  FGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGAST 130
           FGEKRRIPLKLEE+PK L++A +ATED+R+YEH G DP+G+ RAA  +L +G   QGAST
Sbjct: 61  FGEKRRIPLKLEEVPKPLLQAFLATEDARFYEHGGIDPVGVMRAAIVMLTTGEKKQGAST 120

Query: 131 ITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAA 190
           IT Q+ARNFFL+ +K ++RKVKEIFI+ HIEQLL+K EILELY+N+IYLG R+YGVGAAA
Sbjct: 121 ITMQVARNFFLTRDKTIIRKVKEIFISYHIEQLLTKDEILELYVNRIYLGQRAYGVGAAA 180

Query: 191 QAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEY 250
           Q YFGK V+DLTL E+++IAGLPKAPST+NPI S  RA  RRNVVL RM +  YI+KAEY
Sbjct: 181 QVYFGKNVQDLTLSEMSMIAGLPKAPSTLNPITSPSRALARRNVVLMRMNEVGYISKAEY 240

Query: 251 DAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAA 310
            AA  EP++ KYHGAEI+L APY++E+AR +MV++YGEE AYT+G NVYTT+ S+ Q  A
Sbjct: 241 QAAVQEPLIAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSEQQLLA 300

Query: 311 NQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEE 370
            QA  NN+ AYDERHGYRG    LW   +P     Q+   L+      ++ PAAVL+++ 
Sbjct: 301 QQALRNNVYAYDERHGYRGPAAVLWTDAKP--DDAQIKAELAKITPVQELQPAAVLNIDG 358

Query: 371 KSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAI 430
           + A V       + I W+ + WAR+FI D RQG +PKSA++ L  G++IW+R   Q    
Sbjct: 359 QQASVLTAKGETKIIKWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQ---- 414

Query: 431 TAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSA 490
              +L+QVP   +A VA++P NGA+  LVGG++F  +++NR TQ+ RQ+GS+IKPFIY+A
Sbjct: 415 -YLQLSQVPEVASATVALDPTNGAIRTLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAA 473

Query: 491 ALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLR 550
           AL KG TLATLIN+APIN+ D SQGTAWRPKNSP  Y GPTRLR+GLAQS NVM+VR +R
Sbjct: 474 ALEKGFTLATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMR 533

Query: 551 EVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISR 610
            +GLD     LT+FGF  + LPR+E++ALG+ S+TP+Q+A  F+VFAN G+ VEP+YI R
Sbjct: 534 HIGLDAAIAELTKFGFDPNDLPRNESLALGSPSVTPLQVATAFNVFANGGFLVEPYYIER 593

Query: 611 VENPFGNIEFSAEPKVVCHR-----ECSSELDEFAEQ------------DAASPYAPKVI 653
           VE+ FGN+   A P + C       + SS+   F E             +    YAP++I
Sbjct: 594 VEDSFGNVIEKANPTLACKPNNSFVQPSSDPMSFGEPTTQTDEPVAHCFEQTGRYAPQII 653

Query: 654 SEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWR-AQALKRRDIGGKTGTTNDSKDAWYN 712
           SEQ AFL  E L S IWGGG+WS  TGW GT WR AQ +KR DI GKTGTTN+S+D W++
Sbjct: 654 SEQTAFLITEALKSVIWGGGDWSKGTGWQGTAWRAAQLIKRHDIAGKTGTTNESRDTWFS 713

Query: 713 GYAPGIVGVAWVGFDDHSRNLGKTAPNRNIE-DDVSGAESGGKTALPAWVEFMSLALQDV 771
           G+ P +    WVGFDDH R LG+TA N N E D ++G E+G KTA P W EFM+  L+ V
Sbjct: 714 GFGPTLTSTFWVGFDDHGRQLGRTAWNSNGEKDQITGTEAGAKTAGPGWNEFMNNVLKGV 773

Query: 772 PVQQKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYFEAGTEPTEYVSEHVNE-SIYSTSS 830
           P      P  I  VRID  TG LT K D +S FEYF +GTEP EY+SE  +E +++  + 
Sbjct: 774 PETTAIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKEYISESQDENNLFIDAP 833

Query: 831 GEELF 835
            ++LF
Sbjct: 834 TDDLF 838