Pairwise Alignments

Query, 338 a.a., pilus assembly protein PilM from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., type IV pilus assembly protein PilM from Dechlorosoma suillum PS

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 85/342 (24%), Positives = 162/342 (47%), Gaps = 25/342 (7%)

Query: 8   GIDIGHHSIKAAVLKPMG-DTYALVGYEELLVTADIFTDNHTLDYQKIVKKLKELKKGLP 66
           G+DI   ++K   L     D + +  Y   +++ D+  D + ++ +   + +K   K + 
Sbjct: 17  GLDISSSAVKMVELSGNAKDGFRVERYTIEVLSRDVIADGNIVNLEAAAESVKRAWKRMG 76

Query: 67  LFSHKVAIAIPDSAVISKVLQIDSDLEQRELEFAVYQAFSHQSPFPVEELSLDFVKVTEK 126
             + +VA+A+P +AVI+K + + +   + ELE  V    +   PF +EE++LDF +V   
Sbjct: 77  TSTRQVAMALPAAAVITKKIIVPAGQREEELEVLVESEANQYIPFALEEVNLDF-QVIGP 135

Query: 127 SLARSSTTTFQVYATKKDVVDSRLHAVKKAGFEPVLMDVQVHSLLHLWQLASRAYRRPDW 186
           + +        + A++K+ V+ R+   + AG +  +MDV+ ++ L  ++L  R  + PD 
Sbjct: 136 APSSPDEVEVLIAASRKEKVEDRVAVAEAAGLKAAVMDVESYAALAAFELIER--QLPDQ 193

Query: 187 ------MLVDIGYTQSSLCLDFPEKMPFYKDVPLGTRQL------------ESEPSAVNS 228
                  +VDIG   ++L +    +  + ++   G  QL            E   +A  +
Sbjct: 194 GKNQVVAIVDIGANVTNLTVMRNGQQVYAREQAFGGAQLTQDIVRQYGMSFEEADAAKRN 253

Query: 229 LNHPLLHDP--TQRFIQELVDKIARQIQLFTSVHGTQSLGGLWLSGGGATLSGLEDALYQ 286
              P  ++    + F++ L  +++R +Q F +      +  L L+GG A + GL++ +  
Sbjct: 254 GGLPENYEAELLRPFMESLALEVSRALQFFFTSTQYNQVNHLVLAGGCAAIPGLDEVVAT 313

Query: 287 RLSLPCEVLNPFSLFKNNVAKRKRPLV-DGQRFSTAAGLALR 327
           R  + C V NPF+    +   R R LV D      A GLALR
Sbjct: 314 RTQVNCLVANPFAGMSVSDRVRPRNLVNDASSLMVACGLALR 355