Pairwise Alignments

Query, 196 a.a., pilus assembly protein PilN from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., Type IV pilus biogenesis protein PilN from Pseudomonas fluorescens FW300-N2E2

 Score = 84.3 bits (207), Expect = 1e-21
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 6   KVNLLPWRDARREAHKRRFLGLVTLGVLL-AVLMQFAAGEYLGGQMALQQERIGYLQQHI 64
           ++NLLPWR+  RE  ++RFL L  +G L+ AV +   A  Y    +  Q  R  +L + I
Sbjct: 3   RINLLPWREELREERRKRFL-LALVGALVGAVGVVLVAVRYFDSAIDHQVARNSHLSEQI 61

Query: 65  FSLDQQIAKLKIAEEEHKALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMN 124
             LD++I ++   +   + L+ R+ +++ LQ  R  +    +Q+   +P+GVY  ++KM 
Sbjct: 62  AVLDERIKQISELKARRQQLVERMRIIQDLQGNRPVSGRIFDQLVRTLPDGVYFTEVKME 121

Query: 125 GHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIVSGNKRFGKQFQSFKVSFQILTP 184
              + I G ++S  R++ ++ NL+ SD      + E+ +       Q   F+++ +   P
Sbjct: 122 DRTLLIKGAAESNNRVSDLMRNLDSSDLFDTPSLTEVKATTAGQLDQANVFQLTVRQTRP 181

Query: 185 ASNPQA 190
           A    A
Sbjct: 182 ADAEDA 187