Pairwise Alignments

Query, 196 a.a., pilus assembly protein PilN from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., fimbrial assembly family protein (RefSeq) from Shewanella loihica PV-4

 Score = 98.2 bits (243), Expect = 8e-26
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 1/175 (0%)

Query: 7   VNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFS 66
           +NLLPWR+  RE  KR +LG++    + A L+ + A   L      Q+ R  YLQ  I  
Sbjct: 4   INLLPWREEAREKQKRDYLGILAAVFIGAALVVYLALTVLDMMTEEQRGRNAYLQGEIQL 63

Query: 67  LDQQIAKLKIAEEEHKALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGH 126
           L++QIA++K   E  K +  R  ++  LQQ RN  T  ++++  ++P G+Y+  I+  G 
Sbjct: 64  LEKQIAEIKKIRERKKDIERRTEIILNLQQARNLPTHVLDELVRVVPPGIYLSSIEKKGS 123

Query: 127 QIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIVSGNKRFGKQFQSFKVSFQI 181
            + I G S+S   +A M+  ++ S  L D  M  IVS N    +Q Q F +   I
Sbjct: 124 LLWIQGRSESNNNVANMMRKIKASMWLHDPNMQSIVSQNDEM-RQLQRFSLRVSI 177