Pairwise Alignments

Query, 196 a.a., pilus assembly protein PilN from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., type IV pilus biogenesis protein PilN (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.0 bits (245), Expect = 5e-26
 Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 1/175 (0%)

Query: 7   VNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFS 66
           +NLLPWR+  RE  KR ++G++    L + ++ + A   L      Q+ER  YLQ  +  
Sbjct: 4   INLLPWREEAREKQKRDYIGILAAVFLGSGILVYVALSLLEIMTDEQRERNAYLQSEVQQ 63

Query: 67  LDQQIAKLKIAEEEHKALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGH 126
           L+ QIA++K   E  K +  R  ++  LQQ RN  T  ++++  ++P G+Y+  ++  G 
Sbjct: 64  LETQIAEIKKITERKKDIERRTEIILNLQQSRNLPTHVLDELVRIVPPGIYLSSLEKKGS 123

Query: 127 QIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIVSGNKRFGKQFQSFKVSFQI 181
            + I G S+S   +A M+  ++ S+ LTD  M  IV+ +    +Q Q F +   I
Sbjct: 124 LLLIEGRSESNNNVANMMRKVKASEWLTDPNMQSIVTQDDEL-RQLQRFSLRVSI 177