Pairwise Alignments

Query, 196 a.a., pilus assembly protein PilN from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., fimbrial assembly family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  101 bits (251), Expect = 1e-26
 Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 1/175 (0%)

Query: 7   VNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFS 66
           +NLLPWR+  RE  KR ++G++    L + ++ + A   L      Q+ R  YLQ  I  
Sbjct: 4   INLLPWREEAREKQKRDYIGILAAVFLGSAILVYVALSLLDMMTDEQRGRNAYLQSEIQQ 63

Query: 67  LDQQIAKLKIAEEEHKALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGH 126
           LD QIA++K   E  K +  R  ++  LQQ RN  T  ++++  ++P G+Y+  ++  G 
Sbjct: 64  LDAQIAEIKKITERKKDIERRTEIILNLQQSRNLPTHVLDELVRIVPPGIYLSSLEKKGS 123

Query: 127 QIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIVSGNKRFGKQFQSFKVSFQI 181
            + I G S+S   +A M+  ++ S+ LTD  M  IVS +    +Q Q F +   I
Sbjct: 124 LLLIEGRSESNNNVANMMRKVKASEWLTDPNMQSIVSQDDEL-RQLQRFSLRVSI 177