Pairwise Alignments

Query, 199 a.a., fimbrial protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., Type IV pilus biogenesis protein PilO from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (269), Expect = 9e-29
 Identities = 58/189 (30%), Positives = 103/189 (54%), Gaps = 1/189 (0%)

Query: 7   LQELELDEISEWPLLPQLVVILLIMLLIQGAGYWFYLMPKQDEIALLKQEEETVKATLRI 66
           L +L+ + I  WP   + +  +L+++L+ G GY F L   ++++  +++EE T+KA    
Sbjct: 15  LSDLDTNNIGSWPAPIKWLSGVLLVVLVLGLGYNFALSDLENQLQQVREEENTLKAQFAG 74

Query: 67  KANKVAVLPQIQAQLDELKERYDFLLRQLPVQKELASMLASVNQLGLDSSLTFTRIDWGE 126
           KA+  A L +   Q+ +++  +  LLRQLP   E+  +L  + + GL S L F  I    
Sbjct: 75  KAHMAANLERYTEQMKQMEMSFGVLLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLP 134

Query: 127 RESQEFLYRLPLNIELTGSYHDIGDFSQAIAKLPRIINFDDVDWQRVSQES-STLHFRVR 185
             +Q F   LP+ I +TG YHD+  F   +A LPRI+   D +   +  E+ + L   ++
Sbjct: 135 EVTQPFYIELPIQITVTGGYHDLATFVSGVAGLPRIVTLHDFEIAPMEPEAGAKLRMSIQ 194

Query: 186 AYTYQFKQE 194
           A TY++ ++
Sbjct: 195 AKTYRYNEQ 203