Pairwise Alignments

Query, 199 a.a., fimbrial protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., pilus assembly protein, PilO (RefSeq) from Shewanella loihica PV-4

 Score = 95.9 bits (237), Expect = 4e-25
 Identities = 53/193 (27%), Positives = 103/193 (53%), Gaps = 8/193 (4%)

Query: 4   MASLQELELDEISEWPLLPQLVVILLIMLLIQGAGYWFYLMPKQDEIALLKQEEE---TV 60
           ++   +++ + I  WP   ++V    + ++I  AGY+ ++    D I +LK+E++   T+
Sbjct: 5   LSEFNDIDFENIGGWPTQVKVVFASFLAIIIFVAGYFLFV---SDAIDVLKREQDKEITL 61

Query: 61  KATLRIKANKVAVLPQIQAQLDELKERYDFLLRQLPVQKELASMLASVNQLGLDSSLTFT 120
           +   + K    A L   + QL  ++ ++  LL+ LP Q E+  +L  +  +  DS L   
Sbjct: 62  RDDFKAKYQLAANLKLYREQLAVMEVQFAELLKMLPSQNEMPGLLDDLTFVATDSGLGIQ 121

Query: 121 RIDWGERESQEFLYRLPLNIELTGSYHDIGDFSQAIAKLPRIINFDDVDWQRVSQESSTL 180
            ++W E   ++F    P+++ +TG+YH++G     +AKLPRI++  D   +R   +S  L
Sbjct: 122 SLEWQEEIQRDFYIEFPISMSVTGNYHEMGHLVSGVAKLPRIVSLHDFVIKR--SDSGEL 179

Query: 181 HFRVRAYTYQFKQ 193
              + A TY+FK+
Sbjct: 180 AMEILAKTYRFKE 192