Pairwise Alignments

Query, 172 a.a., fimbrial protein from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., Type IV pilus biogenesis protein PilP from Pseudomonas fluorescens FW300-N2E2

 Score = 55.8 bits (133), Expect = 4e-13
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 4/165 (2%)

Query: 10  LMSLLVLVGCKANQ--DDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKGREPFVLP 67
           L  L+ L GC  +    DL +Y+ +V      ++        +E   Y     R PF   
Sbjct: 10  LAGLVALAGCDNDNGFSDLDAYMNEVRLRPPGKIEPTPTFRPYETFTYSAANLRSPFSRQ 69

Query: 68  KEALVQNQPLAKADCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVK 127
                  +     +  +P P      LE + + Q  + G +S+     AL++  AG V +
Sbjct: 70  VRVDQAERQRGSRNV-RPDPNRVKQYLEGFNIEQFEMVGTISNVSGSFALLRG-AGGVHR 127

Query: 128 VKAGQYVGINNGKVTRVDDNYLLINETLPDGLGCWNQRNVKLALK 172
           +K G Y+G N+G++  +    + + E +PDG G W +R   + LK
Sbjct: 128 LKVGDYLGRNDGRIVSISATQVDVVEIVPDGEGAWLERPRTIPLK 172