Pairwise Alignments

Query, 578 a.a., type IV pilus secretin PilQ from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., DNA transporter HofQ from Klebsiella michiganensis M5al

 Score =  251 bits (641), Expect = 4e-71
 Identities = 155/415 (37%), Positives = 243/415 (58%), Gaps = 33/415 (7%)

Query: 166 ISINFQDIPVRNVLQLIADYNGFNLVVSDSVVGNLTLRLDGVPWQQVLDIILQVKGLDKR 225
           +S+   D PV  VLQ +A+    NLVV+  V G ++L+L  VPWQQ L  ++   GL   
Sbjct: 25  VSLVVDDAPVAQVLQSLAELKQKNLVVAPDVSGTVSLQLKEVPWQQALRSVIDSAGLTLT 84

Query: 226 VDGNVILIAPKEELDLREKQA-LEKARLAEELGDLKSEIIKINFAKASDIAAMIGGEGNV 284
             G+V+ +        ++ Q   E+A+  + L  L+   + + +A   D+A    GE   
Sbjct: 85  QQGSVLYVHTLVWQKAQQAQLEAERAKRLQNL-PLQGHSMSLRYADVEDLAK--AGE--- 138

Query: 285 NMLSERGSISIDERTNSLLIRELPDNIAVIREIIESLDIPVKQVQIEARIVTVKEGNLEE 344
            +LS RG +++D+RTN LLIR+   ++  +   ++ +D+PV QV++ A IV++ E +L E
Sbjct: 139 KLLSARGHLTVDKRTNRLLIRDDAQHLPALIAWVQEMDVPVGQVELAAHIVSMSETSLRE 198

Query: 345 LGVRWGVMSTNGSHSVGG--SIESNLWQKGLLADDEFPVDEFLNVNLASTSANASSIAFQ 402
           LGV+W +   +     G   ++ SNL                  V  AST A      F 
Sbjct: 199 LGVKWSLADASSPPGSGKLTTLSSNL-----------------AVGDASTRAG-----FN 236

Query: 403 VAKLGSGTLLDLELSALQNESKAEIISSPRLITTNKQPAYIEQGTEIPY-LESSSSGAST 461
           + ++G G LL+LELSAL+ + K +II+SPRL+ ++ QPA I+QG+EIPY + S  SGA++
Sbjct: 237 IGRIG-GRLLELELSALEQKQKVDIIASPRLLASHMQPASIKQGSEIPYQVSSGESGATS 295

Query: 462 VAFKKAVLSLKVTPQITPDNRLVLDLSVTQDRRGETVKTGTGEAVSIDTQRIGTQVLVNN 521
           V FK+AVL ++VTP +   +R+ L L ++++  G+ +K   GE ++ID Q I TQV V +
Sbjct: 296 VEFKEAVLGMEVTPTVLHHDRVRLKLRISENTPGQVLKQENGEVLAIDKQEIETQVEVKS 355

Query: 522 GETVVLGGIFQHSINNSVDKVPLLGDLPVLGALFRRTYEQMGKSELLIFVTPKVV 576
           GET+ LGGIF      S D +PLLGD+P LG LFRR  +   + EL++F+TP+++
Sbjct: 356 GETLALGGIFAQKNKTSRDGIPLLGDIPWLGQLFRRDGKDNERRELVVFITPRIL 410