Pairwise Alignments

Query, 174 a.a., shikimate kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score = 79.0 bits (193), Expect = 8e-20
 Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 3/165 (1%)

Query: 7   IFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGADIAWVFDVEGEEGFRKREEAV 66
           I L+G  GAGKST+G+ LA  +   F++ +  IE + G  ++ +  + G+EGFR+ E+  
Sbjct: 143 IGLIGLRGAGKSTLGKMLADSIGWSFVELNREIERQNGLSVSEIIALYGQEGFRRMEQTA 202

Query: 67  IND-LTEQQGIVLATGGGSVISKENRNRLSARGIVVYLETTIEKQLART-NRDKKRPLLQ 124
           ++  L  ++ IVLATGGG V      +++      ++L+   E+ ++R   +   RP+  
Sbjct: 203 LSRLLARKEPIVLATGGGIVSEPITFDQILTSFYTIWLKAEPEEHMSRVRGQGDLRPMAD 262

Query: 125 TDCPREVLEQLAEDRNPLYEEIADITVRTDDQSAKVVANQIVKML 169
                + L  + + R PLY   A + + T   S +  A ++V M+
Sbjct: 263 DRAAMQELRTILQSREPLYARAAGV-LDTAGLSVEAAAQKLVAMV 306