Pairwise Alignments

Query, 366 a.a., 3-dehydroquinate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., 3-dehydroquinate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  453 bits (1165), Expect = e-132
 Identities = 228/355 (64%), Positives = 282/355 (79%), Gaps = 2/355 (0%)

Query: 7   ERITVNLGERSYPISIGAGLFANPALLS-LSAKQKVVIVTNHTVAPLYAPAIISLLDHIG 65
           ++I V+LGERSYPI IG  L ++   LS    K++++IVTN TVAPLY   +   +   G
Sbjct: 3   QQIQVDLGERSYPIYIGQSLMSDSETLSRYLLKKRILIVTNETVAPLYLKQVQDTMASFG 62

Query: 66  CQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGFAAACYQRG 125
              +++ L DGEQ+K L   +++ + LL+ NY RD V++ALGGGVIGD+ GFAAACYQRG
Sbjct: 63  EISSVI-LSDGEQFKDLTHLDSIFTALLQRNYGRDSVLVALGGGVIGDMTGFAAACYQRG 121

Query: 126 VDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKAVVIDTDCLTTLPAREFAAG 185
           +DFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP+ V+IDT+CL TLPAREFAAG
Sbjct: 122 IDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPQIVIIDTECLQTLPAREFAAG 181

Query: 186 MAEVIKYGIIYDSAFFDWLEAQMEALYALDEQALTYAIARCCQIKAEVVAQDEKESGIRA 245
           MAEVIKYGI++D+ FF WLE  ++AL +LD QAL YAI+RCC+IKA+VV+QDE E G+RA
Sbjct: 182 MAEVIKYGIMWDADFFQWLENNVQALKSLDTQALVYAISRCCEIKADVVSQDETEQGVRA 241

Query: 246 LLNLGHTFGHAIEAHMGYGNWLHGEAVSAGTVMAAKTAQLQGLIDASQFERILAILKKAH 305
           LLNLGHTFGHAIEA MGYGNWLHGEAV+AGTV+AA+TA+  GLID S   RI+ +L+   
Sbjct: 242 LLNLGHTFGHAIEAEMGYGNWLHGEAVAAGTVLAAQTAKSLGLIDESIVCRIVQLLQAFD 301

Query: 306 LPVRTPENMTFADFMQHMMRDKKVLAGELRLVLPTSIGTSAVVKGVPEAVIAQAI 360
           LPV+ PE+M F  F+QHM RDKKVL G++RLVLPT+IG + V   VPE+ + Q I
Sbjct: 302 LPVKAPESMDFESFIQHMRRDKKVLGGQIRLVLPTAIGRAEVFSQVPESTLEQVI 356