Pairwise Alignments

Query, 277 a.a., DNA adenine methylase from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., site-specific DNA-methyltransferase (adenine-specific) (RefSeq) from Shewanella amazonensis SB2B

 Score =  355 bits (912), Expect = e-103
 Identities = 175/275 (63%), Positives = 207/275 (75%), Gaps = 2/275 (0%)

Query: 3   KQRAFLKWAGGKYSLVEDIQRHLPEARELVEPFVGAGSVFLNTDFERYLLADINPDLINF 62
           KQRAFLKWAGGK+ L++D++RHLPE + LVEPFVGAGSVFLNT ++ YLL DIN DLI  
Sbjct: 4   KQRAFLKWAGGKFKLMDDLRRHLPEGKRLVEPFVGAGSVFLNTQYDAYLLCDINQDLIGL 63

Query: 63  YNLLKTEPQAYIHEAKRWFVPENNRKEVYLDIRKQFNQSDDAMFRSLAFLYMNRFGFNGL 122
           Y ++K +P+ YI  A+  F  E N K+ Y DIR +FN+S D   R++ FLY+NR GFNGL
Sbjct: 64  YKIVKAQPEEYIRAARALFCDEMNAKDAYYDIRSRFNKSKDPFSRAVYFLYLNRHGFNGL 123

Query: 123 CRYNKKGGFNVPFGSYKKPYFPEQELEFFAEKAQRATFICASYGETFARAQSDSVIYCDP 182
           CRYN+KG FNVPFGSYKKPYFPEQE+  F+ KAQRA F C SY + F  A S  VIYCDP
Sbjct: 124 CRYNRKGEFNVPFGSYKKPYFPEQEIRAFSIKAQRAEFRCISYEQAFELATSGDVIYCDP 183

Query: 183 PYAPLSTTANFTSYAGNGFTLDDQAALADIAEKTAKERGISVLISNHDTTHTRRLYRGAQ 242
           PYAPLSTTA+FT+Y G GFTLDDQA LA  +   A ERGI VLISNHD   TR LY GA+
Sbjct: 184 PYAPLSTTASFTTYVGAGFTLDDQALLARHSRHIAVERGIPVLISNHDIPLTRGLYLGAK 243

Query: 243 LNVVKANRTISRNGAGRNKVDELLALF--TPHLSS 275
           L  VK  R IS+ G+GRNKVDEL+AL+  T HL +
Sbjct: 244 LETVKVQRNISQKGSGRNKVDELMALYDETFHLEA 278