Pairwise Alignments

Query, 277 a.a., DNA adenine methylase from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., type II DNA modification methyltransferase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 36/275 (13%)

Query: 5   RAFLKWAGGKYSLVEDIQRHLPEARELVEPFVGAGSVFLNTDFERY-LLADINPDLINFY 63
           +  + W GGK  LV++I    PE    VEPF G  ++F + D  R  ++ D+N DL+N Y
Sbjct: 3   KPIIPWMGGKRRLVKEILPLFPEHHTYVEPFCGGAAMFFSKDEARVEVVNDMNGDLVNLY 62

Query: 64  NLLKTEPQAYIHEAK-------RWFVPENNRKEVYLDIRKQFNQSDDAMFRSLAFLYMNR 116
            ++K   + +I   K        +   +N   E   DI+           R+  F Y+ +
Sbjct: 63  RVIKHHLEEFIRHFKWALISREEFLWQKNTNPETLTDIQ-----------RASRFYYLQK 111

Query: 117 FGFNG-LCRYNKKGGFNVPFGSYKKPYFPEQELEFFAEKAQRATFICASYGETFAR-AQS 174
             F G +   N     + P G        E++L     +  R       + E   R  + 
Sbjct: 112 LAFGGKVSSQNFGSSASRPAGLNLLRI--EEDLSIAHLRLARTYIERLDWAECVRRYDKP 169

Query: 175 DSVIYCDPPYAPLSTTANFTSYAGNGFTLDDQAALADIAEKTAKERGISVLISNHDTTHT 234
           +++ Y DPPY    +TA +    G  F L+  A +A++A KT K +   ++IS +D    
Sbjct: 170 ETLFYLDPPY---WSTAGY----GVEFGLEQYALMAELA-KTIKGK---MVISVNDIPEM 218

Query: 235 RRLYRGAQLNVVKANRTISRNGAGRNKVDELLALF 269
           R ++ G Q+  +    T+   G+GR+   + L ++
Sbjct: 219 REVFAGLQMKTLGIKYTV--GGSGRSGEQQELLIW 251