Pairwise Alignments

Query, 338 a.a., tryptophan--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., tryptophanyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score =  149 bits (375), Expect = 2e-40
 Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 7/220 (3%)

Query: 6   VLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDPQA-LHEATLDAL 64
           V+SG++PSG L +G+Y G L+ W ++Q +Y+C +C+VD HA+T   +    + +  +D  
Sbjct: 10  VVSGMRPSGRLHLGHYNGVLKNWVKLQHEYECFFCIVDWHALTTDYENSGEISQNIMDMA 69

Query: 65  AICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKD--KSARYANDVN 122
              LA GV P  +TLF+QS VPEHA+L  +L+  + +G L R+  +K+  ++ ++ +   
Sbjct: 70  VDWLAAGVSPSSATLFIQSQVPEHAELHLLLSMISPLGWLERVPSYKELQQNLQHKDLDT 129

Query: 123 AGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEPYI 182
            G  GYP+L AADIL+Y A  VPVG+DQ  H+E ARD+A RFN++Y  E       E  I
Sbjct: 130 YGFLGYPLLQAADILIYRAGLVPVGADQLPHIEFARDVARRFNHLYGREADFEDKAEAAI 189

Query: 183 PTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKK 222
             +  +   L  + +K  +   +    +  L   ++IIK+
Sbjct: 190 RKLGKKTSRLYVSLRKSYQEQGD----VDALNTARAIIKE 225



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 198 KMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDVENKAGIANLMGLYSAAT 257
           KM+KS+ N    I L + P  I +KI +  TD     R       +  +  +  ++SA  
Sbjct: 269 KMAKSNSN---AIYLRDTPNEIEEKIRRMPTDPARVHRSDPGEPTRCPVWQMHLVHSAQD 325

Query: 258 GKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIRNDREYLNSVMRDGAEKA 317
              +AE   + AG+      K  + +++ + L P+Q        + + + S++ +GAE A
Sbjct: 326 VCQWAEQGCRSAGIGCL-ECKAPLIDSIKSDLAPLQERALDYEQNPDLVRSILAEGAEHA 384

Query: 318 SAKALQTLKKVYAAVG 333
             +A +TL +V  A+G
Sbjct: 385 RDEARETLIEVRQAMG 400