Pairwise Alignments

Query, 338 a.a., tryptophan--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., tryptophanyl-tRNA synthetase TrpS from Phaeobacter inhibens DSM 17395

 Score =  273 bits (697), Expect = 6e-78
 Identities = 146/334 (43%), Positives = 207/334 (61%), Gaps = 4/334 (1%)

Query: 4   PIVLSGVQPSGELSIGNYLGALRQWQQMQ-DDYDCQYCVVDLHAITVRQDPQALHEATLD 62
           P V SG+QPSG L +GNYLGAL+++   Q  D +  YC+VD+HAITV QDP  L ++T +
Sbjct: 8   PRVFSGIQPSGNLHLGNYLGALKRFVDWQAKDVESIYCMVDMHAITVWQDPADLKKSTRE 67

Query: 63  ALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYANDVN 122
             A  +A G+DP++S L  QS VPEHAQL W+ NC  +MG + RMTQ+KDK+ + A + +
Sbjct: 68  LCAGFIAAGLDPEQSILINQSQVPEHAQLAWIFNCVARMGWMQRMTQWKDKAGKNAQNAS 127

Query: 123 AGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEPYI 182
            GLF YP LMAADIL+Y A  VPVG DQKQHLEL RDIA +FN+ Y  +   F + EP I
Sbjct: 128 LGLFAYPALMAADILVYHATHVPVGEDQKQHLELTRDIAMKFNHDYGVD--FFPVTEPVI 185

Query: 183 PTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDVEN 242
                RVMSL+D +KKMSKSD +  + I L +D  +I KKI KA+TD +  P     +E 
Sbjct: 186 EGAATRVMSLRDGSKKMSKSDASDASRINLTDDADTIAKKIRKAKTDPDALPSEVEGLEG 245

Query: 243 KAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIRND 302
           +    NL+ +Y+A   ++  ++     G + +  FK  + +  VA + P+  E  R+   
Sbjct: 246 RPEARNLVNIYAAMAEQSVDQVLTDVGG-KAFSEFKPMLADLSVAKMSPITTEMARLMQH 304

Query: 303 REYLNSVMRDGAEKASAKALQTLKKVYAAVGFVA 336
           ++ ++ ++  G+E+A       L+K Y  VG VA
Sbjct: 305 QDEIDKILARGSERAREITAPILRKTYDIVGMVA 338