Pairwise Alignments

Query, 338 a.a., tryptophan--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., tryptophanyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  460 bits (1183), Expect = e-134
 Identities = 224/335 (66%), Positives = 269/335 (80%), Gaps = 4/335 (1%)

Query: 1   MSKPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDPQALHEAT 60
           M+KPIVLSG QPSGEL+IGNY+GALRQW  MQD +DC YCVVDLHAITVRQDPQ L +A 
Sbjct: 1   MTKPIVLSGAQPSGELTIGNYMGALRQWVAMQDSHDCLYCVVDLHAITVRQDPQKLRDAC 60

Query: 61  LDALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYAND 120
           LD LA+ LA GVDPKKST+F+QS VP+H QLGW LNCYTQMGELSRMTQFKDKS ++AN+
Sbjct: 61  LDTLALYLACGVDPKKSTVFIQSQVPQHTQLGWALNCYTQMGELSRMTQFKDKSQKHANN 120

Query: 121 VNAGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEP 180
           +N GLFGYPVLMAADILLY A+++PVG DQKQHLEL RDIATRFNN Y      FTIPEP
Sbjct: 121 INVGLFGYPVLMAADILLYQANEIPVGQDQKQHLELTRDIATRFNNAYG---ETFTIPEP 177

Query: 181 YIPTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDV 240
           +IP + A+VMSLQD  KKMSKSDDNR NVI LLEDPK+++KK+ KA TD++ PP + +DV
Sbjct: 178 FIPELGAKVMSLQDPLKKMSKSDDNRNNVIGLLEDPKAVMKKLKKAMTDSDEPPVVRFDV 237

Query: 241 ENKAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIR 300
           ENK G++NL+ L S  TG++ A +EA++ G +MYG  K   GEAVV MLEP+Q  ++  R
Sbjct: 238 ENKPGVSNLLSLMSGVTGQSIASLEAEFEG-KMYGHLKVAAGEAVVGMLEPLQERFKEYR 296

Query: 301 NDREYLNSVMRDGAEKASAKALQTLKKVYAAVGFV 335
            D+ +LN VM +GAEKA A+A  TLKKVY  +G +
Sbjct: 297 ADQSFLNQVMHEGAEKAQARAEVTLKKVYEKIGLL 331