Pairwise Alignments

Query, 338 a.a., tryptophan--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., tryptophanyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  462 bits (1189), Expect = e-135
 Identities = 227/335 (67%), Positives = 269/335 (80%), Gaps = 4/335 (1%)

Query: 1   MSKPIVLSGVQPSGELSIGNYLGALRQWQQMQDDYDCQYCVVDLHAITVRQDPQALHEAT 60
           M+KPIVLSG QPSGEL+IGNY+GALRQW  MQD +DC YCVVDLHAITVRQDPQAL EA 
Sbjct: 1   MTKPIVLSGAQPSGELTIGNYMGALRQWVAMQDSHDCLYCVVDLHAITVRQDPQALREAC 60

Query: 61  LDALAICLAVGVDPKKSTLFVQSHVPEHAQLGWVLNCYTQMGELSRMTQFKDKSARYAND 120
           LD LA+ LA GVDPKKST+F+QS VP+H QLGW LNCYTQMGELSRMTQFKDKS ++AN+
Sbjct: 61  LDTLALYLACGVDPKKSTVFIQSQVPQHTQLGWALNCYTQMGELSRMTQFKDKSQKHANN 120

Query: 121 VNAGLFGYPVLMAADILLYGAHQVPVGSDQKQHLELARDIATRFNNIYSPEQPIFTIPEP 180
           +N GLFGYPVLMAADILLY A+++PVG DQKQHLEL RDIATRFNN Y      FTIPEP
Sbjct: 121 INVGLFGYPVLMAADILLYQANEIPVGQDQKQHLELTRDIATRFNNAYG---ETFTIPEP 177

Query: 181 YIPTVNARVMSLQDATKKMSKSDDNRKNVITLLEDPKSIIKKINKAQTDAETPPRIAYDV 240
           +IP   A+VMSLQD  KKMSKSDDNR NVI LLEDPK+++KK+ KA TD++ PP + +D+
Sbjct: 178 FIPEHGAKVMSLQDPLKKMSKSDDNRNNVIGLLEDPKAVMKKLKKAMTDSDEPPVVRFDI 237

Query: 241 ENKAGIANLMGLYSAATGKTFAEIEAQYAGVEMYGPFKKDVGEAVVAMLEPVQAEYQRIR 300
           ENK G++NL+ L S  TG++ A +EA++ G +MYG  K   GEAVV MLEP+Q  Y+ +R
Sbjct: 238 ENKPGVSNLLSLMSGITGQSIASLEAEFEG-KMYGHLKGAAGEAVVGMLEPLQERYRALR 296

Query: 301 NDREYLNSVMRDGAEKASAKALQTLKKVYAAVGFV 335
            DR YL+ VMR GAE A A+A  TLKKVY  +G +
Sbjct: 297 ADRAYLDQVMRAGAENAQARAEVTLKKVYEKIGLL 331