Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., extracellular solute-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)

Query: 23  PLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLVLEALKKQEIEYQLHFMPWARVQ 82
           PL V   D   WPP+++     + E  E L G    L+    ++     +   MP  R  
Sbjct: 29  PLHVAYND---WPPYSW-----SDEVGEPL-GLDVDLLKAFARRVGCVLEFDKMPARRSH 79

Query: 83  QELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLGYFTLPENSKDLNLATDSDVL 140
           Q +    G+ D+   AS  AER EY++FSVP    Q+G F++ +N   ++L +   VL
Sbjct: 80  QLMH--LGKVDIMMGASKTAEREEYAHFSVPYRLEQVGLFSI-DNGGVVSLGSWQQVL 134