Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 59.7 bits (143), Expect = 6e-14
 Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 31/233 (13%)

Query: 26  VCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLVLEALKKQEIEYQLHFMPWARVQQEL 85
           +CV +   +PPF Y+  + + E      G    ++  A  +  + +++  +PW R  +E+
Sbjct: 32  ICVENTE-FPPFNYFDRNQSVEPRS--IGYDIDILNLAFGQSVLSHKVIALPWNRCLKEV 88

Query: 86  AQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLGYFTLPENS------KDLNLATDSDV 139
            Q T   D    AS  +ER      S P Y +   Y+ L  +       + L        
Sbjct: 89  KQGT--VDAAMSASLNSERRRDYLISTPYYYLTPSYYYLKSDFPKGVEVQRLEELNHYGS 146

Query: 140 LCGVNGFNYQNFAL-PREPSLTLNSVQQALNMLQKERCDWFVSEIEPIYGGIMLGLYQLD 198
           +CG+  FNY+NF L P      + S+     ML K+RC +F++  E + G +        
Sbjct: 147 VCGIKNFNYENFGLKPDFHLFQIRSLAHLPEMLTKKRCQFFLARKETLSGTLA------- 199

Query: 199 RPIQHHFLGKTKEYHVQVRR-SLPNAMPLLNGLNEYILQAQSSGHAQAVFDRF 250
                  + K ++++ ++   + PNA P       Y+L +++S H + +   F
Sbjct: 200 -------INKMEDFYTRLAGITAPNAKP----EPFYMLISKNSPHKETIKQLF 241