Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 98  ASYRAERAEYSYFSVPLYTIQLGYFTLPE------NSKDLNLATDSDVLCGVNGFNYQNF 151
           AS   +RA     SV  Y ++L YF L        +  D+N   +   +CGV GFNY NF
Sbjct: 3   ASLNRQRATDYIPSVAYYYLKLSYFYLKAELDPQFHIDDINQLANFGTVCGVKGFNYHNF 62

Query: 152 ALPRE-PSLTLNSVQQALNMLQKERCDWFVSEIEPIYGGIML 192
              ++ P   +NS++    ML K RC +F++  E + G + L
Sbjct: 63  GWRKDTPISAINSLRHLPEMLLKRRCKFFLARKEVLAGTLAL 104