Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 42/270 (15%)

Query: 4   MRFMLLLMLVGMAHGALANPLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLVLEA 63
           ++  L+L L+G++   +A      V     +PPF Y      Q       G    +V EA
Sbjct: 7   IKISLVLQLLGLSTPCMAGRELTLVA--TNYPPF-YTNELPDQ-------GGVALVVKEA 56

Query: 64  LKKQEIEYQLHFMPWARVQQELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLGYFT 123
            K++     + F P+AR    L   TG+ D      YR ER +++++S P+  +Q+ ++ 
Sbjct: 57  FKRRGYNASVKFYPFARAA--LLVKTGQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYK 114

Query: 124 LPENSKDLNLATDSDVLCGVNGFNYQNFALPREPSLTL---NSVQQALNMLQKERCDWFV 180
             +N    +  T+        G  Y N        LT    NS +  L  L       F+
Sbjct: 115 RKDNPLSFSQLTELKPFTIGIGRGYANPPEIAGAGLTTEEGNSDEMNLKKL-------FL 167

Query: 181 SEIEPIYGGIMLGLY--------------QLDRPIQHHFLGKTKEYHVQVRRSLPNAMPL 226
             I+ +  G  L  Y              Q+  PI       T+ +H+ V  ++ + + L
Sbjct: 168 KRIDLVLIGHNLAEYLIKQHGDEYTDAFEQVGEPI------ATEVFHLGVSLAVSDQITL 221

Query: 227 LNGLNEYILQAQSSGHAQAVFDRFLSITQT 256
           +   N+ +   +  G   A+  RF  +  T
Sbjct: 222 VAEFNKGLESMKKDGRLAAILSRFPQLLST 251