Pairwise Alignments

Query, 869 a.a., nuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., Nuclease from Xanthomonas campestris pv. campestris strain 8004

 Score =  170 bits (431), Expect = 2e-46
 Identities = 189/669 (28%), Positives = 288/669 (43%), Gaps = 134/669 (20%)

Query: 188 CTLDGAEPSFTTIQQIQGEGSTSPYIQGYPYITNEDFFVKGVVSAVTTGLTKGFYLQSLE 247
           C      P   TI  +QGE + SP+             V+G+V+A T     G ++Q  +
Sbjct: 54  CRAAEGAPQRLTIADVQGEDTRSPF-------DGRLVEVEGIVTADTRLGLAGLFVQ--Q 104

Query: 248 DDYNPNTSEGLFVFTNQSSSDLAPGDVVCVKGKVQEY-----YNLTQLKAENNQWVKQGQ 302
               P  S G+FV T    + +A GD V + G V+E       +LT L+A   + +    
Sbjct: 105 PGTEPRRSHGVFV-TGAGEAQVAVGDRVRIVGTVREVGAGGDASLTTLQATTLEVL---- 159

Query: 303 QAAPQAQAIEILPSDEHFAQTLERYEGMLVKTTPELDMRVTRTFGYDYASRRNNMVLAQG 362
            A+ Q   + +L       + LE     L   T           G D  +    ++ A G
Sbjct: 160 -ASNQPVPVRMLSGPPANWEALEGEHVRLAAVTLN---------GSDRLASNGELIAAFG 209

Query: 363 RINMQPNQQHPAGSEQASQQKLDNAQRRLFVESDAKAPDGQIPYYPTFGRTDVDQDGSTE 422
               QP++   AG+   +Q + DNA+RR+ ++    A +G+ P   ++   + +      
Sbjct: 210 GRLWQPSEVAAAGTPAFAQTEADNARRRVLLDD---ARNGRTPKAVSYLPAEAN------ 260

Query: 423 DYIRIDDTVSGLEGVVSYSYN-EYRLIVTNTISAENLVHNAPRQAKPDLDEGDLRIATFN 481
             +R+   +  ++G+V   Y+ +YR+ V   ++   L    P    P +  GDLRIA+FN
Sbjct: 261 --LRVGSLLRQVDGIVDQRYDGQYRIQVLAPLTLPAL----PAPVAPQVG-GDLRIASFN 313

Query: 482 VLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLMEIENNGFGEG 541
           + N+FN    G        RGA    +F+ Q AK+V  IV L AD+  LME+EN+G    
Sbjct: 314 LENFFNG--NGRGGGFPTKRGARTHEQFQAQLAKLVATIVPLQADVAALMELENDGNDGD 371

Query: 542 SAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIYRDKVVKLAQ 601
           +A+AQLV  +N+  A K K +RFV          D+    G D I  G++YR       Q
Sbjct: 372 TAVAQLVAALNA--AGKDKDWRFV----------DSGSGPGDDAIRVGIVYRS-----TQ 414

Query: 602 NRVIPMPSQQAPEVVDANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVNHFKSKGSAC 661
              +  P+       D++ +V           LA  F+   G   + VA NHFKSKG   
Sbjct: 415 VTPVGKPATLTGGPFDSHSRV----------PLAQAFRSSRGATFVVVA-NHFKSKGC-- 461

Query: 662 WEDAAPVEQGGQAGKDLDYQG--ACEN-FRVAAAVAL-----GDALAKIDGHKVILGDMN 713
                    G  +G D D     AC N  R  +A  L      D         V+LGD N
Sbjct: 462 ---------GNASGADADQHDGQACWNATRTESAKRLHQWLQSDPTGAQTKLAVLLGDFN 512

Query: 714 SYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGLEQFGDAGAEIKHSYGYLNAVAMKHPD 773
           +Y ME PM            +++RA+          + DA A           V +K P 
Sbjct: 513 AYAMETPM------------RSLRAS---------GWQDAFA----------VVGVKQP- 540

Query: 774 SWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQFR 833
            +SY ++   G LDH L+SP++  ++  A +WHIN   +   D     K NLP     +R
Sbjct: 541 -YSYVYDGMSGRLDHALLSPAMAKQLRGAAEWHIN---ADAMDDAGYAKRNLP---GPWR 593

Query: 834 ASDHDPAVL 842
           +SDHDP +L
Sbjct: 594 SSDHDPVLL 602