Pairwise Alignments

Query, 869 a.a., nuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 1076 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 95.5 bits (236), Expect = 2e-23
 Identities = 200/896 (22%), Positives = 325/896 (36%), Gaps = 221/896 (24%)

Query: 27  YADLLISQYVEGSSFNKAIEIANTSDQTVS-LNGYQLAMSTNGSGTWDKTLPLDGQVIAA 85
           Y ++L +   + S++   ++I   S  T+  +   Q   ST+ SG W             
Sbjct: 191 YVEILGAANTDYSAYT-LLQIEGDSGSTLGRITSAQSLGSTDASGYW------------T 237

Query: 86  RDVLVIAHGSANSAILATADLTN--NTVVNFNGNDPIALLNSDGSVHDVVGSMGGADFAK 143
              L   + +    +L   + T   N V++ NG+  + +   D     +  + GG     
Sbjct: 238 TGFLNNVYQNGTQTLLLVRNFTGSVNQVLDSNGDGVLDITPWDSVADGIAVTDGGLG--- 294

Query: 144 DNTLARTTLTP------------------SATYQASDWATQGKDNIDGLGALDTT----- 180
           D T     LTP                  + T  A+DW     D + GL     T     
Sbjct: 295 DRTYTAAILTPGFGGNSLRVGGASRIPNGTDTDTAADWVRNDFD-LAGLPGFPGTPDQGE 353

Query: 181 --TPPSAFNCTLD--GAEPSFTTIQQIQGEGSTSPYIQGYPYITNEDFFVKGVVSAVTTG 236
               P A N  +D     P  T I  IQG G  S  +        +     G+V+AV + 
Sbjct: 354 ALNTPGAANAVVDVPPPPPELTAIYTIQGAGQRSALV-------GQTVTTSGIVTAVDSN 406

Query: 237 LTKGFYLQSLEDDYNPNTSEGLFVFTNQSSSDLAPGDVVCVKGKVQEY---------YNL 287
              GFYLQ    D +  TS+ +FVFT  S+  +A G+ + + G V E+          + 
Sbjct: 407 ---GFYLQDATGDGDIATSDAIFVFTG-STPTVAVGNEIRLSGTVSEFTPGGLSSRNLST 462

Query: 288 TQLKAENNQWVKQGQQAAPQAQAI----EILPS----DEHFAQT---------LERYEGM 330
           TQL    N  V       P A  +     +LPS    D+ F             E  EGM
Sbjct: 463 TQLGGSLNITVLSTGNTLPAAVILGEGGRLLPSSNIDDDAFGSFDPITDGIDFFESLEGM 522

Query: 331 LVKTTPELDMRVTRTFGYDYASRRNNM----VLAQGRINMQPNQQHPAGSEQASQQKLDN 386
            V     L +  T  FG  +    N      +  +G +N+ P+  +P             
Sbjct: 523 RVTAQNLLVVNGTNGFGEIFGVVDNGAGATGLSDRGTLNISPDDFNP------------- 569

Query: 387 AQRRLFVESDAKAPDGQIPYYPTFGRTDVDQDGSTEDYIRIDDTVSGLEGVVSYSYNEYR 446
              R+ V+ D+   +   P                   + + D +  + GV+ Y +  ++
Sbjct: 570 --ERVQVQFDSGVFNFDFPD------------------VNVGDGIGAVTGVLGYDFGNFQ 609

Query: 447 LIVTNTISAENLVHNAPRQAKPDLDEGD--LRIATFNVLNYFNSPFGGDANQHGDNRGAN 504
           ++ T   S  ++     +     L  G+  L +AT+NVLN   +   GDA+       AN
Sbjct: 610 IVATEDFSG-SIQRGGLQPEVSTLTRGNDQLTVATYNVLNLDPNDNDGDADI------AN 662

Query: 505 NLAEFEVQQAKIVNAIVRLDADIVGLMEIENNG--FGEGSAIAQLVNQ--INSQIADKKK 560
              +F     +I+N +     DI+ L E+++N     +G   A L  Q  +++  A    
Sbjct: 663 G--QFAAIARQIINNLN--SPDIIALQEVQDNSGSLNDGVTAANLTLQTLVDAIAAAGGP 718

Query: 561 HYRFVA---IDSNGDGKTDAADSLGTDVITTGVIYRDKVVKLAQNRVIPMPSQQAPEVVD 617
            Y F+    I +N  G    A+      I T  +Y    V   ++ +  + SQQ  E   
Sbjct: 719 TYAFIDNPFITNNASGGQPGAN------IRTAYLYDPSRVSFVEDSLTTIGSQQPGEAFA 772

Query: 618 ANGKVIEDGKNYQRDTLAPTFKVKGGNEKITVAVNHFKSKGSAC--WEDAAPVEQGGQAG 675
                        R  L   F+  G  E +T+  NHF SKG +      A P E      
Sbjct: 773 G-----------ARLPLVADFEFNG--ETVTLVNNHFSSKGGSAPILGTAQPFE---SRQ 816

Query: 676 KDLDYQGACENFRVAAAVALGDALAKIDGHK-----VILGDMNSYGMEDPMLVLTDYTPE 730
           +D    G+ ++ R A + A+ D +    G+      ++LGD N +    P+  L      
Sbjct: 817 EDSTVNGSLDD-RQAQSQAVQDYVNGRLGNDPTAKVIVLGDFNEFEFVSPVRDL------ 869

Query: 731 KYGKTIRAARNTYIAGLEQFGDAGAEIKHSYGYLNAVAMKHPDSWSYSFNDEVGALDHLL 790
                   A NT +  L +                   +   + +++ F     ++DH+L
Sbjct: 870 --------AANTGLTNLTEL------------------LPENERYTFIFQGNSQSIDHIL 903

Query: 791 VSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQFRASDHDPAVLELNI 846
           VS SL            N AE  + + N EF  +L       +ASDHDP +    I
Sbjct: 904 VSGSL-----------ANRAEIDIVNVNTEFAESL-------QASDHDPVLARFTI 941