Pairwise Alignments

Query, 869 a.a., nuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., extracellular nuclease (RefSeq) from Shewanella amazonensis SB2B

 Score =  608 bits (1568), Expect = e-178
 Identities = 375/883 (42%), Positives = 520/883 (58%), Gaps = 53/883 (6%)

Query: 12  STLALAISFGLVAPSYADLLISQYVEGSSFNKAIEIANTSDQTVSLNGYQLAMSTNGSGT 71
           + +A+A+S  +   + AD++I++YVEGSS NKAIE+ N+ D  V L GY LA   +G+ T
Sbjct: 8   TAIAVAVSAAMPLLANADVMITEYVEGSSNNKAIELYNSGDAAVDLTGYTLARYKDGATT 67

Query: 72  WDKTLPLDGQVIAARDVLVIAHGSANSAILATADLTNNTVVNFNGNDPIALLNSDGSVHD 131
               + LDGQ +AA+ + VI H SA   + A  D     +  FNG D +AL+  DG++ D
Sbjct: 68  PSNMVALDGQSLAAKGIKVITHPSAVITLPAGTDTMTGDLY-FNGTDAVALMK-DGAIVD 125

Query: 132 VVGSMGGA-DFAKDNTLARTT--LTPSATYQASDWATQGKDNIDGLGALDTTTPPS--AF 186
           VVG++    D+  + T+AR T  L  +  Y  +DW T   DN  GLG+L+ TT P   AF
Sbjct: 126 VVGAIPTPKDWGLNVTIARKTSALAAATVYNEADWETSAIDNFSGLGSLEGTTAPEVPAF 185

Query: 187 NCTLDGAEPSFTTIQQIQGEGSTSPYIQGYPYITNEDFFVKGVVSAVTTGLTKGFYLQSL 246
           +C  D   P    I  IQG G  SP +    + ++ +  ++GVVSA    L KGFYLQ +
Sbjct: 186 SCAGDTLIP----IYDIQGSGDKSPLVPEGKFESDTEVTLRGVVSARGESLFKGFYLQDV 241

Query: 247 EDDYNPNTSEGLFVFTNQSSSD-LAPGDVVCVKGKVQEYYNLTQLKAENNQWVKQGQQAA 305
           + D +P TS+G+FVF  +++ + + PG  VCV+GKV+EY+ LTQ+  + ++  + G +  
Sbjct: 242 QGDNSPLTSDGIFVFLGEAAPEAIQPGVEVCVQGKVKEYFGLTQIDIKADKKFEVGAKGD 301

Query: 306 PQAQAIEILPSDEHFAQTLERYEGMLVKTTPELDMRVTRTFGYDYASRRNNMVLAQGRIN 365
             A A   +   E   Q LER+EGM V      +M+V+RTF YDYA RRNN++L+     
Sbjct: 302 VPAAAAFAVTEGESLEQALERFEGMKVVLDAGSEMKVSRTFSYDYAGRRNNLMLSHKAPL 361

Query: 366 MQPNQQHPAGSEQASQQKLDNAQRRLFVESDAKAPDGQIPYYPTFGRTDVDQDGSTEDYI 425
           M+P Q +PA SE+A   +  N    LFVESD KA DG +P+ P F         +   YI
Sbjct: 362 MKPTQVYPALSEEAVALEKQNRGNELFVESDFKAADGVVPFLPDF--------NAETGYI 413

Query: 426 RIDDTVSGLEGVVSYSYNEYRLIVTNTISAENLVHNAPRQAKPDL-DEGDLRIATFNVLN 484
           R+ D + GLEG+VSYSYNEYRL+ TNTI+  ++V    R   P + ++GD+R+A+FNVLN
Sbjct: 414 RVGDELKGLEGMVSYSYNEYRLVTTNTITPADIVRGMDRTDAPVVAEKGDIRVASFNVLN 473

Query: 485 YFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVRLDADIVGLMEIENNGFGEGSAI 544
           +FN   GGDAN  G NRGA    E  +Q+ KIVNAI  ++ADIVGLMEI NNGFGE SAI
Sbjct: 474 FFNDVVGGDANPTGSNRGALTEEEMLLQRTKIVNAITAMNADIVGLMEIANNGFGEKSAI 533

Query: 545 AQLVNQINS-QIADKKKHYRFVAIDSNGDGKTDAADSLGTDVITTGVIYR-DKVVKLAQN 602
             L++ +N+ Q AD    +  +A     DGK       G D IT G++YR  KV      
Sbjct: 534 QNLLDALNAEQSADNAYSFVEIAEADKTDGK-----YFGNDAITVGMLYRAAKVSPEGTA 588

Query: 603 RVIPMPSQQAPEVVDA--NGKVIEDG---KNYQRDTLAPTFKVKGGNEKITVAVNHFKSK 657
            VI  P Q APE V +  N   +E       YQR +L  TFKVK  +E +TV VNH KSK
Sbjct: 589 FVIETPEQHAPEGVASRDNKGTVETSPAQDKYQRHSLGQTFKVK--DENLTVVVNHLKSK 646

Query: 658 GSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALAKIDGHKVILGDMNSYGM 717
           GS C ED    ++        D QG C  FRV+AA  +G+A+  I+G  +++GD+N+YGM
Sbjct: 647 GSGCLEDWINFDESRDPA---DLQGKCNAFRVSAAKVIGEAVKDIEGDVLVIGDLNAYGM 703

Query: 718 EDPMLVLTDYTPEKYGKTIRAARNTYIAGLEQFGDAGAEIKHSYGYLNAVAMKH-PDSWS 776
           EDP+ VLTDY      + ++ A  T +AG + +   G+ I+  YG +N     H  D++S
Sbjct: 704 EDPVRVLTDYDATTSNRKVKTASYTTLAG-QSYEQQGSVIEKGYGLINLNTQVHGADTYS 762

Query: 777 YSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKDQFRASD 836
           YS+N E+G LDH L + SL  +VVD  DWHIN  ES LF+Y  +F G+L K ++ F ASD
Sbjct: 763 YSYNGELGNLDHALGNESLAKRVVDIEDWHINSVESNLFEYGKKFTGSLEKSENAFSASD 822

Query: 837 HDPAVLELNI---------YGGSLG--LGALLGLLGLGVWRRR 868
           HDP ++ L+           GG++G  L AL  L+GLG  RRR
Sbjct: 823 HDPVIVALSYPDKVEEKKDDGGAMGGLLLALATLIGLG--RRR 863