Pairwise Alignments

Query, 869 a.a., nuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 948 a.a., extracellular nuclease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  337 bits (865), Expect = 2e-96
 Identities = 285/870 (32%), Positives = 419/870 (48%), Gaps = 130/870 (14%)

Query: 11  RSTLALAISFGLVAPSYAD-LLISQYVEGSSFNKAIEIANTSDQTVSLNGYQLAMSTNGS 69
           ++ LALAIS        AD L+IS+YVEGS  NKAIE+ N +  ++ L+ YQL    NGS
Sbjct: 5   KTLLALAISSVCGFAHGADNLIISEYVEGSGNNKAIELYNPTSSSIDLSQYQLRFYFNGS 64

Query: 70  GTWDKTLPLDGQVIAARDVLVIAHGSANSAILATADLTNNTVVNFNGNDPIALLNSDGSV 129
                T+ L+G  +AA    V+A   A++ ILA  +  ++    FNG+D I L + +  V
Sbjct: 65  TNVGSTISLNG-TLAAGATYVVADNDASADILAVTNQQSSASF-FNGDDAIVLTHQN-QV 121

Query: 130 HDVVGSMG---GADFA------KDNTLARTT--------LTPSATYQASDWATQGKDNID 172
            D +G +G   G+++       +DNTL R          +  + T+    W    KD+I 
Sbjct: 122 IDSLGQVGVDPGSEWGSGDLSTQDNTLRRNPDQLIADPIIDDAVTFNT--WLGFAKDDIA 179

Query: 173 GLGALDTTTP-------PSAFNCTLDGAEPSFTTIQQIQGEGSTSPYIQGYPYITNEDFF 225
            LG     TP       PS+  C     E S T I  +QG  + SP       +  +   
Sbjct: 180 DLGKFSVGTPTDPVDPPPSSLAC----GEAS-TAIHVLQGSTNASP-------LNGQTLV 227

Query: 226 VKGVVSAVTTGLTKGFYLQSLED--DYNPNTSEGLFVFTNQSSSDLAPGDVVCVKGKVQE 283
           V+ +V +      KG ++Q  ++  D +P TSEG+FV+T  + +    GD V +K KV E
Sbjct: 228 VEAIVVSNQEAGLKGIFVQMADNEADNDPQTSEGVFVYTGTAPTGYVAGDRVRLKAKVTE 287

Query: 284 YYNLTQLKAENNQWVKQGQQAAPQAQAIEILPSDEHFAQTLERYEGMLVKTTPELDMRVT 343
           Y  LT+L    +  +    QA P A A+  LP +   +   E +EGM V+ + +L +   
Sbjct: 288 YQGLTELTTVADHKLCVAGQALPSA-AVVTLPVNT--SDDFEPFEGMRVRFSQDLVVNEV 344

Query: 344 RTFGYDYASRRNNMVLAQGRINMQPNQQHPAGSEQASQQKLDNAQRRLFVESDAKAPDGQ 403
              G      R   +L   R +    Q    G++ A      N +  + ++    A +  
Sbjct: 345 YKLG------RYGEILLGSRRHFIGTQVAAPGAD-ALAVTAANQKDSILLDDGLTAQNPD 397

Query: 404 IPYYPTFGRTDVDQDGSTEDYIRIDDTVSGLEGVVSYSYNEYRLIVTNTISAENLVHNAP 463
              +P  G        S  + +R+ D  + L GV+ Y +N YR++ T +I+    V   P
Sbjct: 398 PVIFPAPGL-------SASNTVRVGDKATALTGVMHYGFNLYRIMPTESIT---FVAENP 447

Query: 464 RQAKPDLDEG-DLRIATFNVLNYFNSPFGGDANQHGDNRGANNLAEFEVQQAKIVNAIVR 522
           R   P L EG +L++A+FNVLNYFN    G  +     RGAN L+EFE Q+ KI++A+V 
Sbjct: 448 RPQSPVLAEGGNLKVASFNVLNYFNGD--GQGSGFPTARGANTLSEFERQKTKIISAMVG 505

Query: 523 LDADIVGLMEIENNGFGEGSAIAQLVNQINSQIADKKKHYRFVAIDSNGDGKTDAADSLG 582
           + AD+ GLMEIEN+GFG  SAIA LV  +N+ + + +  Y    I+ N         ++G
Sbjct: 506 IGADVFGLMEIENDGFGANSAIADLVAGLNTAVGENRYAYVIPKINGNN------LSAIG 559

Query: 583 TDVITTGVIYR-DKVVKLAQNRVIPMPSQQAPEVVDANGK-VIEDGKNYQRDTLAPTFKV 640
           TD IT G+IYR DKV      R+  + S  +P  +D  G+ + +DGKN  R  L   F +
Sbjct: 560 TDAITVGLIYRSDKVSPQGDARI--LSSTNSP--LDETGQPLFDDGKN--RPMLTQAFVL 613

Query: 641 KGGNEKITVAVNHFKSKGSACWEDAAPVEQGGQAGKDLDYQGACENFRVAAAVALGDALA 700
            G  E + VAVNH KSKGS C  D   V  G         QG C   R  AA A G  +A
Sbjct: 614 NGSEEALVVAVNHLKSKGSECAGD-PDVNDG---------QGNCNITRTRAATAAGQWIA 663

Query: 701 K--IDGHKVILGDMNSYGMEDPMLVLTDYTPEKYGKTIRAARNTYIAGLEQFGDAGAEIK 758
               +   +++GD+N+Y  EDP+  L +                       F +  A+++
Sbjct: 664 AQYPEQGVLLIGDLNAYAKEDPLTALAN---------------------TGFSELFAKLE 702

Query: 759 HSYGYLNAVAMKHPDSWSYSFNDEVGALDHLLVSPSLKHKVVDATDWHINGAESTLFDYN 818
            +  Y            SY F+ E G LDH L + +L  KVVD T+WHIN  E  + DYN
Sbjct: 703 KANAY------------SYVFSGESGQLDHALANAALVDKVVDVTEWHINTDEPRVLDYN 750

Query: 819 DEFKGNLPKY----KDQFRASDHDPAVLEL 844
           +EFK           D +R+SDHDP V+ L
Sbjct: 751 EEFKTPTQVQDLYASDAYRSSDHDPVVISL 780