Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., tRNA-i(6)A37 methylthiotransferase from Pseudomonas fluorescens FW300-N2E2

 Score =  149 bits (376), Expect = 2e-40
 Identities = 126/446 (28%), Positives = 211/446 (47%), Gaps = 35/446 (7%)

Query: 41  GCPKNLVDSERILTQL-RTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIG---EAL 96
           GC  N  DS R++  L   +  E+     D+DV+++NTC   + A       +G   E  
Sbjct: 23  GCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVYSQLGRWRELK 82

Query: 97  KENGKVIVT--GCLGAREDE-IRQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSL 153
             N ++++   GC+ ++E   IR   P V  + GP     + E +             S 
Sbjct: 83  LANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARSTKLPQVDVSF 142

Query: 154 VPDHGVKLTPKHY-----AYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKN 208
                    P+       AY+ + EGC+  CTFC++P  RG+ VSRP  ++I E   L  
Sbjct: 143 PEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDDVIAEIIHLAE 202

Query: 209 AGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYV--YPY 266
            GV+E+ ++ Q+ + Y   T H    A+ + +   + A+       GI  R+ Y   +P 
Sbjct: 203 NGVREVTLLGQNVNGYRGLT-HDGRLADLAELIRVVAAVD------GI-DRIRYTTSHPL 254

Query: 267 PHVDEIIPLMAE-GKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVI 325
              D +I   AE  +++ +L +P Q  S R+L  MKR   A     +++K R   P + I
Sbjct: 255 EFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGICI 314

Query: 326 RSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRF 385
            S FIVGFPGETE+DFQ  +  +++   D    F YS   G  A ++ D  PE++K++R 
Sbjct: 315 SSDFIVGFPGETEKDFQQTMKLIEDVGFDFSYSFVYSQRPGTPAADLADDTPEELKKERL 374

Query: 386 E--RFMLVQQEISAAKLQKRIGSTMQVLIDEVDEE--GAI-GRTYADAPEIDGLVYLNGE 440
              +  L QQ    ++  + +GS  ++L+ +  ++  G + GRT     E + +V    +
Sbjct: 375 NALQHRLNQQGFEISR--QMVGSVQRILVTDYSKKDPGELQGRT-----ENNRIVNFRCD 427

Query: 441 TNLKPGELVNVVIEHADEYDLWGSIL 466
           T    G+  +V I+ A  + L GS++
Sbjct: 428 TPALIGQFADVHIDAAQPHSLRGSLI 453