Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  291 bits (745), Expect = 3e-83
 Identities = 167/442 (37%), Positives = 256/442 (57%), Gaps = 23/442 (5%)

Query: 35  IGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGE 94
           I F  LGC KN +D+E ++  L   GY I  +   +DVV+VNTC FI +A +ES+ T+ E
Sbjct: 7   IAFSHLGCEKNRIDTEHMIGLLAEAGYGIDANEALADVVVVNTCSFIQAAREESVRTLVE 66

Query: 95  ALKENGKVIVTGCLGAR-EDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFT-- 151
             +   K+++ GCL    +D++    P  + + G   Y  +++ + +       N  +  
Sbjct: 67  LAESGKKIVIAGCLAQHFQDQLLAELPEAIALVGTGDYHRIVDVLQRTESGERVNAISQE 126

Query: 152 -SLVPDHGV---KLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLK 207
            S + D  +   + T    AYL+++EGC++RC FCIIP +RG   SR +  I+ EA++L 
Sbjct: 127 PSFIADENLPRYRTTTSAVAYLRVAEGCDYRCAFCIIPHLRGKQRSRSIESIVAEAKQLA 186

Query: 208 NAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGI-WVRLHYVYPY 266
             GV+EL++ISQ T+ YG+D         G P+   +  L  +LG++ + W+R+HY YP 
Sbjct: 187 AEGVQELVLISQITTNYGLDRY-------GKPM---LAELLRQLGQVDVPWIRIHYAYPT 236

Query: 267 PHVDEIIPLMAEG-KVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVI 325
               E+I  + E   VLPYLD+P QH+ P +LK M RP Q       I+K +E  P+ V+
Sbjct: 237 GLTPEVIAAIRETHNVLPYLDLPLQHSHPEILKAMNRPWQGNVNDRIIEKLKEALPDAVL 296

Query: 326 RSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRF 385
           R+TFI GFPGETEE F+ L  +++  + D VG F +SP EG AA ++ + +P+DVK+ R 
Sbjct: 297 RTTFIAGFPGETEEHFRHLQQFIQRHEFDHVGVFAFSPEEGTAAIDLPNPVPDDVKEARR 356

Query: 386 ERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGA--IGRTYADAPEIDGLVYLNGETNL 443
           +  M  QQ I+  + + +IG  + VLI++        IGR+   APE+DG+VY+ G+  L
Sbjct: 357 DALMATQQPIAERRNRAQIGRLVDVLIEQEHPSTGLKIGRSARFAPEVDGVVYVQGDAAL 416

Query: 444 KPGELVNVVIEHADEYDLWGSI 465
             G+LV V I  AD YDL G +
Sbjct: 417 --GQLVTVRITDADIYDLHGEV 436