Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) from Shewanella loihica PV-4

 Score =  136 bits (343), Expect = 1e-36
 Identities = 113/425 (26%), Positives = 198/425 (46%), Gaps = 41/425 (9%)

Query: 34  KIGFVSLGCPKNLVDSERILTQL-RTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92
           K+   + GC  N  DS ++   L   +GY +     ++DV+++NTC   + A ++    +
Sbjct: 4   KLHIKTWGCQMNEYDSSKMADLLDEYQGYTLTEEAEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 93  G--EALKENGKVIVTG---CLGAREDE-IRQVHPNVLGITGP---HAYQNVLEHVHQYAP 143
           G  + LK+    ++ G   C+ ++E + I+     V  I GP   H    ++E + Q   
Sbjct: 64  GRWKTLKDKNPNLIIGVGGCVASQEGKAIKDRAQCVDLIFGPQTLHRLPEMIEQIQQGGK 123

Query: 144 KPAHNPFTSL-----VPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGE 198
                 F  +     +P+   +      A++ I EGC+  C+FC++P  RG+ VSRPV +
Sbjct: 124 AVIDVSFPEIEKFDRLPEPRAEGPS---AFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDD 180

Query: 199 IIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGI-W 257
           +I E  +L   GV+E+ ++ Q+ +AY   T H       + +   + A+       GI  
Sbjct: 181 VILEIAQLAEQGVREVNLLGQNVNAYRGAT-HDDDICTFAELLRYVAAID------GIDR 233

Query: 258 VRLHYVYPYPHVDEIIPLMAEG-KVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKW 316
           +R    +P     +II +  +  +++ +L +P Q  S  +L  MKR   A      I++ 
Sbjct: 234 IRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRL 293

Query: 317 REICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQI 376
           R+  P++ I S FIVGFPGE+++DF   +  +++ Q D    F YS   G  A+++ D +
Sbjct: 294 RKARPDIQISSDFIVGFPGESKQDFADTMKLIEDVQFDHSFSFIYSARPGTPASDLPDDV 353

Query: 377 PEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGLVY 436
             D K++R             A LQ RI  T Q +       G + R   + P +   + 
Sbjct: 354 SLDEKKERL------------AILQDRI--TQQAMRYSRQMLGTVQRILVEGPSVKNPME 399

Query: 437 LNGET 441
           L G T
Sbjct: 400 LRGRT 404