Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., Conserved hypothetical alanine, arginine-rich protein from Mycobacterium tuberculosis H37Rv

 Score =  188 bits (478), Expect = 3e-52
 Identities = 136/442 (30%), Positives = 221/442 (50%), Gaps = 30/442 (6%)

Query: 41  GCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGF---IDSAVQESLDTIGEALK 97
           GC  N+ DSER+   L   GY       ++DVV+ NTC      D+ +  +L  +    +
Sbjct: 33  GCQMNVHDSERLAGLLEAAGYRRATDGSEADVVVFNTCAVRENADNRLYGNLSHLAPRKR 92

Query: 98  ENG--KVIVTGCLGARE-DEIRQVHPNVLGITGPH---AYQNVLEH-----VHQYAPKPA 146
            N   ++ V GCL  ++ D + +  P V  + G H   +   +LE      V Q     A
Sbjct: 93  ANPDMQIAVGGCLAQKDRDAVLRRAPWVDVVFGTHNIGSLPTLLERARHNKVAQVEIAEA 152

Query: 147 HNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERL 206
              F S +P         + A++ IS GCN+ CTFCI+PS+RG  V R   +I+ E   L
Sbjct: 153 LQQFPSSLPS---SRESAYAAWVSISVGCNNSCTFCIVPSLRGREVDRSPADILAEVRSL 209

Query: 207 KNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHN--IKALSEELGKMGIWVRLHYVY 264
            N GV E+ ++ Q+ +AYGV       FA+ +  R+      L    G +    R+ +  
Sbjct: 210 VNDGVLEVTLLGQNVNAYGVS------FADPALPRNRGAFAELLRACGDIDGLERVRFTS 263

Query: 265 PYP--HVDEIIPLMAEGK-VLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICP 321
           P+P    D++I  MA+ + V P L +P Q  S R+L+ M+R  +AER L  I++ R   P
Sbjct: 264 PHPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIP 323

Query: 322 ELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVK 381
              I +  IVGFPGETEEDF   LD ++ A+      F+YS   G  A +++ Q+P+ V 
Sbjct: 324 HAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQLDGQLPKAVV 383

Query: 382 QDRFERFMLVQQEISAAKLQKRIGSTMQVLI--DEVDEEGAIGRTYADAPEIDGLVYLNG 439
           Q+R+ER + +Q++IS    +  +G  ++VL+   E  ++    R    A +   + +  G
Sbjct: 384 QERYERLIALQEQISLEANRALVGQAVEVLVATGEGRKDTVTARMSGRARDGRLVHFTAG 443

Query: 440 ETNLKPGELVNVVIEHADEYDL 461
           +  ++PG+++   +  A  + L
Sbjct: 444 QPRVRPGDVITTKVTEAAPHHL 465