Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase from Methanococcus maripaludis JJ

 Score =  136 bits (342), Expect = 2e-36
 Identities = 107/389 (27%), Positives = 186/389 (47%), Gaps = 19/389 (4%)

Query: 34  KIGFVSLGCPKNLVDSERILTQLRT-EGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92
           KI     GC  N  D+E I   +   E +E+ ++  DSD++++NTC          +  I
Sbjct: 2   KIYIEGYGCTLNTADTEIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMISRI 61

Query: 93  GEALKENGKVIVTGCLG-AREDEIRQ-----VHPNVLGITGPHAYQNVLEHVHQYAPKPA 146
                 + KV+V GC+  A   +I       + P     +G      +L+   +   +  
Sbjct: 62  EYFKSLDKKVVVAGCMAKALSKKIENLADVLIMPREAQHSGNILKDKLLKDCFEKNNEST 121

Query: 147 HN-PFTSLVPDHGVKLTPKHY-AYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAE 204
            N  F   + +   K++ +     L I EGC   CT+CI+   RG+LVS     I+ +AE
Sbjct: 122 QNLNFEDRLNEKIKKVSSQGLITALPICEGCLGSCTYCIVKRARGNLVSYDRDLIVKKAE 181

Query: 205 RLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELG-KMGIWVRLHYV 263
            L   G K LLV +QDT+ YG+D   +L     S + ++I  + E+   ++G+   +H  
Sbjct: 182 ELVKTGTKCLLVTAQDTACYGLDNNDNL-----SNLINDISEIPEKFAMRIGM---MHAK 233

Query: 264 YPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPEL 323
           +  P +DE+I      KV+ +L +P Q    +VLK M R    +  +  + +++     L
Sbjct: 234 FAEPILDELIESFKSEKVVKFLHLPIQSGDDQVLKDMNRNYTVDEFISVLNEFKSKIKNL 293

Query: 324 VIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQD 383
              +  IVGFP ETEE FQ  L+ +K+ + D     KYS  +   A  ++ Q+   ++++
Sbjct: 294 NFTTDVIVGFPTETEEAFQNTLEIVKKIKPDFTHAAKYSQRKYTKAAVLK-QVDTKIRKE 352

Query: 384 RFERFMLVQQEISAAKLQKRIGSTMQVLI 412
           R E    +++E+S    ++ IG T ++L+
Sbjct: 353 RSEILNELRRELSYENNKRHIGETFEILV 381