Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  686 bits (1770), Expect = 0.0
 Identities = 326/471 (69%), Positives = 398/471 (84%), Gaps = 5/471 (1%)

Query: 1   MTVQTFTPNQTTTLETAKKTIAEQSQNSQTTGN-----KIGFVSLGCPKNLVDSERILTQ 55
           MTV+TF P QTTTLET  KT+   S +S  TGN     +IGFVSLGCPKNLVDSERILTQ
Sbjct: 1   MTVETFHPKQTTTLETPAKTLEAASADSVNTGNVATGNRIGFVSLGCPKNLVDSERILTQ 60

Query: 56  LRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEI 115
           LR +GYE+ NSY ++D+VIVNTCGFID+AV+ESLD + EAL+ENGKVIVTGCLGA+E++I
Sbjct: 61  LRIDGYEVTNSYDNADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQI 120

Query: 116 RQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGC 175
           R+VHP+VL ITGPH+Y+ VL+HVH+Y PKP HNPFTSL+P  GVKLTPKHYAYLKISEGC
Sbjct: 121 REVHPDVLEITGPHSYEAVLKHVHKYVPKPEHNPFTSLIPQTGVKLTPKHYAYLKISEGC 180

Query: 176 NHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFA 235
           ++RCTFCIIP++RGDL SR  G ++ EA+RL  AGV+E+LV+SQDTSAYG D      F 
Sbjct: 181 DNRCTFCIIPALRGDLDSRGAGSVLDEAKRLVEAGVQEILVVSQDTSAYGKDKGGRTDFW 240

Query: 236 NGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPR 295
           NG PV+ +I +L+ +LGKMG WVRLHY+YPYP VD++IPLMAEG +LPYLDIP QHASPR
Sbjct: 241 NGMPVKQDITSLARQLGKMGAWVRLHYIYPYPWVDDLIPLMAEGLILPYLDIPMQHASPR 300

Query: 296 VLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDR 355
           +LKMMKRPG+ +R LE I++WREICP+LVIRSTFIVGFPGETEEDF++LLD+L+EA+LDR
Sbjct: 301 ILKMMKRPGRVDRQLEAIQRWREICPDLVIRSTFIVGFPGETEEDFEMLLDFLREARLDR 360

Query: 356 VGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEV 415
           VGCFKYS VEGA AN I + I E+VK+DR+ RFM VQ EISA +L + +G TM +LID+V
Sbjct: 361 VGCFKYSEVEGAVANTIAELISEEVKEDRYHRFMEVQAEISAERLARFVGRTMDILIDDV 420

Query: 416 DEEGAIGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSIL 466
           DEEGAIGR++ADAPEIDG+V++NGET L+PG LV  VI H+DE+DLW  ++
Sbjct: 421 DEEGAIGRSFADAPEIDGMVFINGETELEPGMLVRAVITHSDEHDLWAELV 471