Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (343), Expect = 1e-36
 Identities = 112/426 (26%), Positives = 191/426 (44%), Gaps = 43/426 (10%)

Query: 34  KIGFVSLGCPKNLVDSERILTQL-RTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92
           K+   + GC  N  DS ++   L   +GY +     ++D++++NTC   + A ++    +
Sbjct: 4   KLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVFHQL 63

Query: 93  G--EALKENGKVIVTG---CLGAREDEIRQVHPNVLGIT-GPHAYQNVLEHVHQY----- 141
           G  + LK+    ++ G   C+ ++E +  +     + I  GP     + E + Q      
Sbjct: 64  GRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIEQVRRGEK 123

Query: 142 ----APKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVG 197
                  P    F  L        T    A++ I EGC+  C+FC++P  RG+ VSRP  
Sbjct: 124 AVIDVSFPEIEKFDRLPEPRAEGPT----AFVSIMEGCSKYCSFCVVPYTRGEEVSRPSD 179

Query: 198 EIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGI- 256
           +II E  +L   GV+E+ ++ Q+ +AY   T H  G    + +   + A+       GI 
Sbjct: 180 DIILEIAQLAEQGVREVNLLGQNVNAYRGAT-HDGGICTFAELLRYVAAID------GID 232

Query: 257 WVRLHYVYPYPHVDEIIPLMAEG-KVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKK 315
            +R    +P     +II +  +  +++ +L +P Q  S R+L  MKR   A      I++
Sbjct: 233 RIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRR 292

Query: 316 WREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQ 375
            R+  P++ I S FI+GFPGET+EDF   +  +++   D    F YS   G  A ++ D 
Sbjct: 293 LRKARPDIQISSDFIIGFPGETQEDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDD 352

Query: 376 IPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGLV 435
           +  + K+ R             A LQ RI  T Q +       G + R   + P +   +
Sbjct: 353 VDMEEKKQRL------------AILQDRI--TQQAMRYSRHMMGTVQRILVEGPSVKNPM 398

Query: 436 YLNGET 441
            L G T
Sbjct: 399 ELRGRT 404