Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., tRNA-i(6)A37 modification enzyme MiaB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (352), Expect = 1e-37
 Identities = 111/396 (28%), Positives = 181/396 (45%), Gaps = 36/396 (9%)

Query: 39  SLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKE 98
           + GC  N+ DS+ +   L   G+     + ++ + IVNTC   D   Q+    +G   + 
Sbjct: 10  TFGCQMNVNDSDWLARALMERGFSPA-PFGEARLTIVNTCSVRDKPEQKVYSLLGRIRQA 68

Query: 99  NGK-----VIVTGCLG--------AREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKP 145
             K     V V GC+         +R  ++R V         P A   ++E       K 
Sbjct: 69  TSKKPDAFVAVGGCVAQQIGSGFFSRFPQVRLVFGTDGLAMAPQALDRLVEEPDL---KL 125

Query: 146 AHNPFTSLVPDHGVKL---TPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGE 202
           +   F+   P+    L         ++ I +GC++ C +CI+P  RG   SR  G I+ E
Sbjct: 126 SLLDFSEDYPERDAVLGQGAVPASVFVNIMQGCDNFCAYCIVPYTRGRQKSRATGTILDE 185

Query: 203 AERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHY 262
              L + G +E+ ++ Q+ +++G D+ H  G    + + H + AL       G+  RL +
Sbjct: 186 CRALLDRGAREITLLGQNVNSFGQDS-HGDG-TTFAQLLHKVAALP------GL-ERLRF 236

Query: 263 VYPYPHVDEIIPLMAEG-----KVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWR 317
           V P+P   +I P + E       + P L +P Q  S R+LK+M R     R L  +   R
Sbjct: 237 VTPHPK--DIAPEVVEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLR 294

Query: 318 EICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIP 377
              P++V+ S  IVGFPGETEEDF   +D L+         F YS   G  A  + D++ 
Sbjct: 295 AARPDIVLSSDIIVGFPGETEEDFMETMDALETVGYAASYSFCYSDRPGTRAEMLPDKLS 354

Query: 378 EDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLID 413
            +VK +R ER   +Q  ++   LQ  +G  ++VL++
Sbjct: 355 REVKLERLERLQTLQNRLTERCLQDMVGRKVEVLLE 390