Pairwise Alignments

Query, 263 a.a., DUF1338 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  322 bits (826), Expect = 4e-93
 Identities = 160/258 (62%), Positives = 194/258 (75%), Gaps = 1/258 (0%)

Query: 5   ALFQSLWNDYIERLCPSADRVHQLLQEDEPLINDHIALRTFNLAPLGLETLAKPFLALGY 64
           ALF +LW DYI+ + PSA +VH+LL   +P+INDHIALRTFN+A + L  LA+ F +LGY
Sbjct: 7   ALFAALWQDYIQ-MTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGY 65

Query: 65  QACGEYEFKSKKLFAKHFEHPDPLQPKVFISELKVEECSPELQAIVEKLVAQVQPQALAS 124
            ACG+Y+F+ KKL AKHFEHPD  QPKVFISEL VEE S  LQ+ ++ L+AQV  QA  +
Sbjct: 66  VACGDYKFEQKKLIAKHFEHPDATQPKVFISELLVEEFSSALQSTIQGLIAQVDEQATKA 125

Query: 125 EAFLYGGRLWSLSHADYLTLAKESEYAAWLAAHGYGANHFTVSVNQLNALHEVKQVNDHL 184
           + F+Y GR W+L    Y  L +ESEYAAW+AA GY ANHFTVS+N L     ++ VND L
Sbjct: 126 DNFIYSGRHWTLDSKTYEALLEESEYAAWVAAFGYRANHFTVSINHLEGFDTLESVNDAL 185

Query: 185 RQHGFSINESGGEVKGSPEVLLEQSSTMADKVLVRFNEGAEMIPGGFYEFAKRYPMANGQ 244
           +Q GF +N SGGE+KGSPEVLLEQSSTMADK+ V F++    IP  FYEFA RYP ANG+
Sbjct: 186 KQAGFVLNTSGGEIKGSPEVLLEQSSTMADKIAVEFSDATVEIPSCFYEFALRYPKANGE 245

Query: 245 LYPGFVEASADKIFESTN 262
           LY GFV ASADKIFESTN
Sbjct: 246 LYTGFVAASADKIFESTN 263