Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  342 bits (878), Expect = 2e-98
 Identities = 208/571 (36%), Positives = 314/571 (54%), Gaps = 17/571 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           M+    I  +     +L   S  + PGD++GLVG NG GKST   ++       +G   +
Sbjct: 1   MLRLDRISKIYPTGEVLRDVSWEVKPGDRIGLVGVNGAGKSTQMRIIAGLEEATSGEIIR 60

Query: 61  PAHWELAWVAQETPA-LDRTALEYVIDGDRE-------YRELERQLMDAEAA---DNGTK 109
           P+  ++A++ QE     +RT  E +     E         E+E Q+  AE     D   +
Sbjct: 61  PSSLKIAYLQQEFDIDPERTVREELWQAFGEATTVFNQLSEVEHQMQTAEPEQLDDLIHQ 120

Query: 110 VADLHGKIEMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSD 169
           +  L  + E + GY+I AR ++LL  LGF  E    S+  FSGGW+MR+ L + L+   D
Sbjct: 121 LDRLQRRFEALDGYAIDARIAKLLPDLGFGLEDGDRSVAAFSGGWQMRMGLGKILLQEPD 180

Query: 170 LLLLDEPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTG 229
           LLLLDEPTNHLDL+ + WLE +L+     +++ISHDR+FLD +  +IV  E      Y G
Sbjct: 181 LLLLDEPTNHLDLETIEWLETYLKGLSQPMVIISHDREFLDRLCTQIVETERGVARTYLG 240

Query: 230 NYSSFETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEKV 289
           NYS + TQ+  +   Q A +++QQK++A  Q++IDRFR  A+++ QA+SR K LE++E++
Sbjct: 241 NYSDYLTQKELEKTAQFAAFERQQKELAEQQAFIDRFRASATRSTQAKSREKQLEKVERI 300

Query: 290 LPAQFDNPFSFEFREPAA--LPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRN 347
             A  DN    +FR P A      ++M++ +   Y D ++     L +  G RI  LG N
Sbjct: 301 -EAPEDNLRGIQFRFPPAPRSGREVVMIEDLTHAYNDKILFLGAELLIERGDRIAFLGPN 359

Query: 348 GAGKSTLIKLLSGELKPQSGDCTY-SQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKN 406
           GAGKSTL++L+ G      G     +  V   YF Q+Q E L  E+T L  +    P   
Sbjct: 360 GAGKSTLLRLILGREPLLEGKVELGAHQVIPSYFEQNQAEALDLEKTVLDTIHDEVPSWK 419

Query: 407 ELELRNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMR 466
           + E+R  LGSF F  +   +KV   SGGEKARL LA ++ Q  NLL+LDEPTNHLD+  +
Sbjct: 420 DSEVRTLLGSFCFRSDTVFKKVGALSGGEKARLALAKMLLQPANLLILDEPTNHLDIPAK 479

Query: 467 QALTLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAE 526
           + L  AL+ YEG  +IVSHDRY +    + +  + D +   + GD + Y + +  Q K E
Sbjct: 480 EMLEEALREYEGTALIVSHDRYFVSRVANKIVEIRDGEFRVYAGDYHYYLEQI--QLKKE 537

Query: 527 RKETQPTNTANSANSAAAKKEQKRREADFRK 557
           R+         ++ +AA + +QK ++ + R+
Sbjct: 538 RERLAAIEAEKASKAAAKRAKQKAKQQERRQ 568