Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  363 bits (932), Expect = e-104
 Identities = 195/527 (37%), Positives = 307/527 (58%), Gaps = 12/527 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MI    I      + L  +ASA ++ G+K+GLVG NG GK+TLF ++  +   D G  + 
Sbjct: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60

Query: 61  PAHWELAWVAQETPAL-DRTALEYVIDGD-------REYRELERQLMDAEAADNGTKVAD 112
                + +  Q+   +  R+A+  V++G         E  ELE  + D +  D    + +
Sbjct: 61  EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120

Query: 113 LHGKI----EMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRS 168
            +G++    E + GY++  RA E+L GL F+QE M   + + SGGW+MR+ LA+ L+ R 
Sbjct: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180

Query: 169 DLLLLDEPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYT 228
           D++LLDEP+NHLDL++++WLE +L+ Y G L++ SHDR+F++ IV +I+ I+   L  Y+
Sbjct: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEIDGGALTTYS 240

Query: 229 GNYSSFETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEK 288
           G+Y  ++ QRA    QQQA +++QQ  +A    +I+RF+ +AS A Q QSR+K LE++++
Sbjct: 241 GDYGFYDEQRALNARQQQAQFERQQAMLAKEIKFIERFKARASHASQVQSRVKKLEKIDR 300

Query: 289 VLPAQFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNG 348
           V P +     +FEF         ++ +  V   YG   I + +   +    R  ++G NG
Sbjct: 301 VEPPRRRQTVAFEFLPAPRSGEDVVNLKSVHKTYGSRTIYDGLDFMVRRRERWCIMGING 360

Query: 349 AGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNEL 408
           AGKSTL+KL++G   P  G  +    VK+GYFAQH ++ L  E T LQ + +  P   + 
Sbjct: 361 AGKSTLLKLVTGTTNPDKGSVSLGASVKLGYFAQHSMDLLDGESTILQWLEERFPKAGQA 420

Query: 409 ELRNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQA 468
            LR   G FGF G+   ++    SGGEKARLV+A +++  PN L+LDEPTNHLDLD ++ 
Sbjct: 421 PLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEM 480

Query: 469 LTLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDY 515
           L  AL +Y+G M+ VSHDR  L A ++ +  +    +  + G  ++Y
Sbjct: 481 LIKALSAYQGTMLFVSHDRRFLSALSNRVLELTPDGINQYGGGYSEY 527



 Score = 95.5 bits (236), Expect = 5e-24
 Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 30/241 (12%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           ++    +    G + + +     +   ++  ++G NG GKSTL  L+      D GS S 
Sbjct: 324 VVNLKSVHKTYGSRTIYDGLDFMVRRRERWCIMGINGAGKSTLLKLVTGTTNPDKGSVSL 383

Query: 61  PAHWELAWVAQETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMV 120
            A  +L + AQ +                        L+D E+    T +  L  +    
Sbjct: 384 GASVKLGYFAQHS----------------------MDLLDGES----TILQWLEERFPKA 417

Query: 121 GGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHL 180
           G   +RA A       GF+ + +       SGG + RL +A  L    + L+LDEPTNHL
Sbjct: 418 GQAPLRALAG----CFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHL 473

Query: 181 DLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQ 240
           DLD    L + L +Y GT++ +SHDR FL  + NR++ +    +N+Y G YS +  +  Q
Sbjct: 474 DLDTKEMLIKALSAYQGTMLFVSHDRRFLSALSNRVLELTPDGINQYGGGYSEYVERTGQ 533

Query: 241 K 241
           +
Sbjct: 534 E 534