Pairwise Alignments
Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 540 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 369 bits (947), Expect = e-106
Identities = 199/527 (37%), Positives = 306/527 (58%), Gaps = 12/527 (2%)
Query: 1 MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
MI I + L +ASA ++ G+K+GLVG NG GK+TLF ++ E D G +
Sbjct: 1 MIRLETITKQTSHRILFFEASAALNRGEKIGLVGPNGAGKTTLFRMITGEEAPDEGQVAV 60
Query: 61 PAHWELAWVAQETPAL-DRTALEYVIDGD-------REYRELERQLMDAEAADNGTKVAD 112
+ + Q+ + RTA+ V+DG E LE + D AD+ + +
Sbjct: 61 EKQVSIGYFNQDVGEMAGRTAVAEVMDGAGPVSAVASELAVLEAAMADPGRADDMDTIIE 120
Query: 113 LHGKI----EMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRS 168
+G++ E +GGY + RA E+L GL F+QE M + SGGW+MR+ L + L+ R
Sbjct: 121 RYGEVQARFEELGGYELEGRAREVLAGLSFSQEMMDSDVGALSGGWKMRVALGRILLMRP 180
Query: 169 DLLLLDEPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYT 228
D +LLDEP+NHLDL++++WLE +L+ Y G L++ SHDR+FL+ IV +I+ I+ L Y+
Sbjct: 181 DAMLLDEPSNHLDLESLIWLEDFLKGYEGALLMTSHDREFLNRIVTKIIEIDGGALTSYS 240
Query: 229 GNYSSFETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEK 288
G+Y+ +E QRA QQQA +++QQ +A +I+RF+ +AS A Q QSR+K L+++E+
Sbjct: 241 GDYAFYERQRALNEKQQQAQFERQQAMLAKELKFIERFKARASHASQVQSRVKKLDKIER 300
Query: 289 VLPAQFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNG 348
P + SF+F + ++++ +V+ GYG I + + R ++G NG
Sbjct: 301 FEPPRRRQSVSFDFPQAPRSGEDVVVLREVSKGYGARAIYQGFDFKIRRKERWCVMGVNG 360
Query: 349 AGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNEL 408
AGKSTL+KL++G P SG + VK+GYF+QH +E L + T + + P +
Sbjct: 361 AGKSTLLKLVAGATTPDSGSVSVGGSVKMGYFSQHAMEVLDGDNTVFESLESAFPQAGQG 420
Query: 409 ELRNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQA 468
LR G FGF G+ +K SGGEKARLV+A +++ PN L+LDEPTNHLDLD ++
Sbjct: 421 SLRALAGCFGFSGDDVEKKCRVLSGGEKARLVMATLLFNPPNFLVLDEPTNHLDLDTKEM 480
Query: 469 LTLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDY 515
L AL Y+G M+ VSHDR+ L ++ + + + +DG +Y
Sbjct: 481 LITALADYDGTMLFVSHDRHFLATLSNRVLELTPEGIHQYDGGYTEY 527
Score = 96.7 bits (239), Expect = 2e-24
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 30/241 (12%)
Query: 1 MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
++ E+ G + + + I ++ ++G NG GKSTL L+ T D+GS S
Sbjct: 324 VVVLREVSKGYGARAIYQGFDFKIRRKERWCVMGVNGAGKSTLLKLVAGATTPDSGSVSV 383
Query: 61 PAHWELAWVAQETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMV 120
++ + +Q A+E V+DGD T L
Sbjct: 384 GGSVKMGYFSQH-------AME-VLDGDN------------------TVFESLESAFPQA 417
Query: 121 GGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHL 180
G S+RA A GF+ + + SGG + RL +A L + L+LDEPTNHL
Sbjct: 418 GQGSLRALAG----CFGFSGDDVEKKCRVLSGGEKARLVMATLLFNPPNFLVLDEPTNHL 473
Query: 181 DLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQ 240
DLD L L Y GT++ +SHDR FL + NR++ + + +++Y G Y+ + + Q
Sbjct: 474 DLDTKEMLITALADYDGTMLFVSHDRHFLATLSNRVLELTPEGIHQYDGGYTEYVARTGQ 533
Query: 241 K 241
+
Sbjct: 534 E 534
Score = 89.7 bits (221), Expect = 3e-22
Identities = 76/277 (27%), Positives = 112/277 (40%), Gaps = 48/277 (17%)
Query: 338 GSRIGLLGRNGAGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQH-------------- 383
G +IGL+G NGAGK+TL ++++GE P G + V IGYF Q
Sbjct: 27 GEKIGLVGPNGAGKTTLFRMITGEEAPDEGQVAVEKQVSIGYFNQDVGEMAGRTAVAEVM 86
Query: 384 -----------QLETLHPE----------ETPLQHMMQIAPDKNEL-------ELRNYLG 415
+L L +T ++ ++ EL R L
Sbjct: 87 DGAGPVSAVASELAVLEAAMADPGRADDMDTIIERYGEVQARFEELGGYELEGRAREVLA 146
Query: 416 SFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQS 475
F E V SGG K R+ L I+ +P+ +LLDEP+NHLDL+ L L+
Sbjct: 147 GLSFSQEMMDSDVGALSGGWKMRVALGRILLMRPDAMLLDEPSNHLDLESLIWLEDFLKG 206
Query: 476 YEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAERKETQPTNT 535
YEGA+++ SHDR L + + + + GD Y + Q+ K+ Q
Sbjct: 207 YEGALLMTSHDREFLNRIVTKIIEIDGGALTSYSGD----YAFYERQRALNEKQQQAQFE 262
Query: 536 ANSANSAAAKK--EQKRREADFRKLTAPIRKKLTQLE 570
A A K E+ + A KKL ++E
Sbjct: 263 RQQAMLAKELKFIERFKARASHASQVQSRVKKLDKIE 299