Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  768 bits (1982), Expect = 0.0
 Identities = 379/635 (59%), Positives = 488/635 (76%), Gaps = 4/635 (0%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MIT ++ QL+RG K LL++AS T++PG KVGLVG NG GKS+L AL+   L++D G  S 
Sbjct: 1   MITITQAQLIRGSKTLLDEASLTVYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEISV 60

Query: 61  PAHWELAWVAQETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMV 120
           P  W++A VAQETPAL+ +ALEYVIDGDREYRELE  L  A+  DNG ++A LHGKI+ +
Sbjct: 61  PTGWQIATVAQETPALEVSALEYVIDGDREYRELEEALHKAQLEDNGHQIALLHGKIDAI 120

Query: 121 GGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHL 180
           GGYSIRARA+ LL GLGF++ +    +  FSGGWRMRLNLAQAL+CRS+LLLLDEPTNHL
Sbjct: 121 GGYSIRARAASLLAGLGFSEAEQQNPVKSFSGGWRMRLNLAQALLCRSELLLLDEPTNHL 180

Query: 181 DLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQ 240
           DLD + WLE W+++Y GTLILISHDRDF+D IV+ IVH+E+  LN Y GNY++FE  RA+
Sbjct: 181 DLDTMYWLESWIKAYQGTLILISHDRDFIDAIVDEIVHVEHHKLNYYKGNYTAFERIRAE 240

Query: 241 KMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEKVLPAQFDNPFSF 300
           +M QQQ  Y++QQK+ AHMQS++DRFRYKASKA+QAQSR+KALERM ++LP++ D+PF  
Sbjct: 241 RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSKADSPFYM 300

Query: 301 EFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSG 360
            FR P ALPNP++ M+QV+ GYGD  IL  + LNLVPG+RIGLLGRNGAGKSTLIKLL+ 
Sbjct: 301 AFRAPEALPNPLVKMEQVSVGYGDKAILNHVHLNLVPGARIGLLGRNGAGKSTLIKLLAE 360

Query: 361 ELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELELRNYLGSFGFH 420
           +LKP SG    + G+ IGYFAQHQLE L  +E+PLQH+ ++AP+  E ELR++LG +GF+
Sbjct: 361 QLKPMSGLYEPNPGLNIGYFAQHQLEFLRLDESPLQHLTRLAPNNREQELRDFLGGYGFN 420

Query: 421 GEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSYEGAM 480
           G+ AL  V PFSGGEKARLVLAL+VWQ+PNLLLLDEPTNHLDL+MR ALT+ALQ +EGAM
Sbjct: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQDFEGAM 480

Query: 481 VIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAERKETQPTNTANSAN 540
           +IVSHDR+LLR +  D YLV   +V  FDGDL+DY++WL D  K   K        + A 
Sbjct: 481 IIVSHDRHLLRLSCSDYYLVDGGEVKSFDGDLDDYHQWLLDAAKEANKPA----AQDDAT 536

Query: 541 SAAAKKEQKRREADFRKLTAPIRKKLTQLEEKLDKLNHVVSEMEAQLSDTSLYEAQNKAT 600
            A  KK QKR EA+ R+  +P++K   +LE+     +  ++E+E  L+DTSLYEA NKA 
Sbjct: 537 PAQDKKLQKRLEAELRQKLSPLKKAQAKLEKIQQDCSDKLAELENLLADTSLYEADNKAR 596

Query: 601 LTEVLAKQAAAKSELEQVELEWMAEQETLEEMERK 635
           LT++LA++     +LE+ E+EW+  QE +E +E++
Sbjct: 597 LTQILAERTQHTQQLEESEMEWLELQENIEAIEQE 631