Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  283 bits (723), Expect = 2e-80
 Identities = 174/532 (32%), Positives = 285/532 (53%), Gaps = 10/532 (1%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MI+ + I +  G +PL E  SA    G++ GL+G NGCGKST   +L   L   +G+ S 
Sbjct: 1   MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSI 60

Query: 61  PAHWELAWVAQETPALDR-TALEYVIDGDREYREL--ERQLMDAE---AADNGTKVADLH 114
               ++  ++Q+  A ++ T ++ VI GD +  ++  ER  + A+   + ++G +V DL 
Sbjct: 61  TPGLKVGTLSQDQFAFEQYTVIDAVIMGDTQLWKIKQERDAIYAKPDMSEEDGMRVGDLE 120

Query: 115 GKIEMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLD 174
            +   + GYS  +RA E+L   G  +      ++Q + GW++R+ LAQAL    D+LLLD
Sbjct: 121 SEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGWKLRVLLAQALFANPDILLLD 180

Query: 175 EPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSF 234
           EPTN+LD+  + WLE  L     T+I+ISHDR FL+ +   +  I+   L  Y GNY  F
Sbjct: 181 EPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYDYF 240

Query: 235 ETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALE--RMEKVLPA 292
             Q A    Q  A   K+  ++  +Q +++RF   ASKA+QA SR K ++  ++++V  +
Sbjct: 241 LAQSALLREQLLAGNAKKSAEIEELQDFVNRFGANASKAKQASSRAKRMDKIKLDEVKSS 300

Query: 293 QFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKS 352
               P S  F     +    L+++ +  G+    + E   L L  G+++ ++G NG GK+
Sbjct: 301 SRITP-SIRFAPGKKMHRQALVLENLGHGFDGERLFEGGDLILEAGAKLAIIGENGVGKT 359

Query: 353 TLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQ-IAPDKNELELR 411
           TL++ L  EL    G   +S+   IGY  Q        + T ++ M Q   P  N+L +R
Sbjct: 360 TLLRCLVNELIHNEGTIKWSENAAIGYCPQDSTSDFDNDLTIIEWMDQWRQPKHNDLMVR 419

Query: 412 NYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTL 471
             LG   F  + A +K    SGGEK RL+   ++ Q  N++++DEPTNH+D++  +AL  
Sbjct: 420 AMLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIEALNN 479

Query: 472 ALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQ 523
           AL+ +EG ++ VSHDR  + +    +  + D ++  F G  ++Y   L   Q
Sbjct: 480 ALKDFEGTLIFVSHDREFVSSLATRIIDIKDKKLVNFQGTFDEYLASLASVQ 531