Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  468 bits (1204), Expect = e-136
 Identities = 261/634 (41%), Positives = 373/634 (58%), Gaps = 18/634 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           M+   +I     G+PLLE ASA I  G KVGLVG+NG GK+TLF L++ ELT+D G  + 
Sbjct: 1   MLRIDDISYSVEGRPLLEHASAVIPSGHKVGLVGRNGTGKTTLFRLIRGELTLDTGEITL 60

Query: 61  PAHWELAWVAQETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMV 120
           P    +  V+QE P  + + L  V+  D E   L   + +AE A +  ++A++  ++  +
Sbjct: 61  PRGARIGGVSQEVPGNEVSLLNTVLAADTERAGL---MAEAETATDPGRIAEIQTRLADI 117

Query: 121 GGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHL 180
             +S  ARAS +L GLGFT+ +     + FSGGWRMR+ LA  L  + DLLLLDEPTN+L
Sbjct: 118 DAWSAEARASSILRGLGFTEPETHQPCSAFSGGWRMRVALAAVLFSQPDLLLLDEPTNYL 177

Query: 181 DLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQ 240
           DL+  +WLE +L  YP T++++SHDR  L+  V  I+H+E++ L  YTG Y  F  QRA+
Sbjct: 178 DLEGALWLEAYLARYPHTVLIVSHDRGLLNRAVGGILHLEDRKLTFYTGPYDQFARQRAE 237

Query: 241 KMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEKVLPAQFDNPFSF 300
           K   Q A  +KQ  + AH++S+++RF+ KASKA+QAQSR+K LE+ME +   +      F
Sbjct: 238 KRALQAAAARKQDAKRAHLESFVNRFKAKASKAKQAQSRVKMLEKMETIRVPEDAARTVF 297

Query: 301 EFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSG 360
            F  P  L  PI+  +  + GY    +L  + L +    RI LLGRNG GKSTL KLL+G
Sbjct: 298 TFPTPEELSPPIVATEGASVGYDGTAVLRGLSLRIDQDDRIALLGRNGEGKSTLSKLLAG 357

Query: 361 ELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELELRNYLGSFGFH 420
            L+   G  T S  ++IG+FAQHQ++ L  EETPLQH++++ PD+ +  LR  L  FG  
Sbjct: 358 RLEAMDGTLTASNKLRIGFFAQHQVDELRVEETPLQHLLRVRPDEGQARLRARLAGFGLM 417

Query: 421 GEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSYEGAM 480
             +A  +V   SGG+KARL L L     P+LL+LDEPTNHLD++ R+AL  AL +Y GA+
Sbjct: 418 AAQAETEVGRLSGGQKARLSLLLATLDAPHLLILDEPTNHLDIESREALVEALTAYTGAV 477

Query: 481 VIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAERKETQPTNTANSAN 540
           ++VSHD +LL    D L+LV D  V P++ DL  Y + L    K  + +  P     +A 
Sbjct: 478 ILVSHDMHLLSLVADRLWLVKDGHVAPYEDDLEAYRQMLLTPDKPRKPKAAP----ETAP 533

Query: 541 SAAAKKEQKRREADFRKLTAPIRKKLTQLEEKLDKLNHVVSEMEAQLSDTSLYEAQNKAT 600
              ++       A+ RK    + KK+T+++EKL K          +L+D +LYE      
Sbjct: 534 KRPSRDAILALRAEARKCEERV-KKITEMQEKLSK----------KLADPALYEDAKAGE 582

Query: 601 LTEVLAKQAAAKSELEQVELEWMAEQETLEEMER 634
           L     K A     L++ E  WMA  E LE+ E+
Sbjct: 583 LETWNRKYAEVMDGLDRAEAMWMAALEKLEKAEK 616