Pairwise Alignments

Query, 201 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  213 bits (541), Expect = 3e-60
 Identities = 103/219 (47%), Positives = 140/219 (63%), Gaps = 20/219 (9%)

Query: 1   MKIEKNTVASLAYQLTIEDGVVVDQSTVDAPLDYLHGHNNLITGLERELEGKVAGDKFTV 60
           MKI +++  ++ Y+L+ ++G +++ S    P+ YLHG  NLI GLE  LEGK  G+K  V
Sbjct: 1   MKITQHSAVTIHYRLSDQEGRLLENSFDAEPMLYLHGTENLIPGLEAALEGKAKGEKLDV 60

Query: 61  TIAPEDAYGEHNEDLVQRVPADVFQGVDELEVGMRFLADTDQGPIPVEITEVDGDEVVVD 120
           TI+ E+AYG +++ L Q VP + F  ++++  GMRF+A+T+ G  PV++ EV  D V+VD
Sbjct: 61  TISAEEAYGPYHDGLRQAVPLEAFGDIEDIVPGMRFIAETEMGQRPVQVVEVKDDVVIVD 120

Query: 121 GNHMLAGQSLTFTVEVVAVRAATEDEIAHGHIHQAGGC-GHDHDHDHDHEGGCCGGEG-- 177
           GNH LAGQ+L+F +E++ VR AT +EIAHGHIH  GGC GH H HDH H GGCCGG G  
Sbjct: 121 GNHPLAGQALSFNIEIIDVREATAEEIAHGHIHAHGGCGGHGHSHDHSHGGGCCGGSGND 180

Query: 178 ----------HGHDHHGH-------GKKEGGCCGGGGCG 199
                     H HDHH H          + GC G GGCG
Sbjct: 181 AGGCCGGSDDHDHDHHHHDHDHEACDTPKAGCDGNGGCG 219