Pairwise Alignments

Query, 211 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., Alginate biosynthesis protein AlgK precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 4/135 (2%)

Query: 72  PSYEFLYGDMLAWGVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERA 131
           P  E L G +   G  V  D +    + +NA  + + AA   LG+ Y RG L Q   ++A
Sbjct: 305 PRAELLLGKLYYEGKWVPADAKAAEAHFQNAVGREV-AADYYLGQIYRRGYLGQVYSQKA 363

Query: 132 IPYLREAAAMGNLNARIQLAELLLRDYGSPLDYEDAYRWLYNSVTADQRTHNRIALLRQG 191
           + +L +AA  G  +A   +A+L  +  G+  +  +AY  +++ +   Q T   I  L Q 
Sbjct: 364 LDHLLKAARNGQNSADFAIAQLFSQGKGTKPNPVNAY--VFSQLAKAQNTPQAIE-LAQT 420

Query: 192 LERRMPENIIARAKR 206
           LE ++P   +A+A+R
Sbjct: 421 LEAQLPPQQLAQAQR 435



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 17/104 (16%)

Query: 92  VELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQ----------------DKERAIPYL 135
           VEL   Y +    +   A L+Q+   ++RG +  Q                  E+    L
Sbjct: 202 VELATVYQKRGQPEQQAALLKQMQDGHARGVVSAQRVDSVARVLADASLGKTDEKTAQSL 261

Query: 136 REAAAMGNLNARIQLAELLLRDYGSPLDYEDAYRWLYNSVTADQ 179
            E  A G   A + LA+LL  D+    D +   ++L N   ADQ
Sbjct: 262 LEGIAPGYPAAWVSLAQLLY-DFPELGDVDKMMQYLENGRAADQ 304